Strain identifier
BacDive ID: 3945
Type strain:
Species: Desulfatibacillum sp.
Strain Designation: S2550
Strain history: <- S. Myhr, Univ. Bergen, Norway; S2550 (Desulfostipes sapovorans) <- B. Thorbjørnsen {1995}
NCBI tax ID(s): 2794877 (species)
General
@ref: 4849
BacDive-ID: 3945
DSM-Number: 12861
keywords: 16S sequence, Bacteria, anaerobe, mesophilic
description: Desulfatibacillum sp. S2550 is an anaerobe, mesophilic bacterium that was isolated from oil reservoir model column.
NCBI tax id
- NCBI tax id: 2794877
- Matching level: species
strain history
- @ref: 4849
- history: <- S. Myhr, Univ. Bergen, Norway; S2550 (Desulfostipes sapovorans) <- B. Thorbjørnsen {1995}
doi: 10.13145/bacdive3945.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Deltaproteobacteria
- order: Desulfobacterales
- family: Desulfobacteraceae
- genus: Desulfatibacillum
- species: Desulfatibacillum sp.
- full scientific name: Desulfatibacillum Cravo-Laureau et al. 2004
@ref: 4849
domain: Bacteria
phylum: Proteobacteria
class: Deltaproteobacteria
order: Desulfobacterales
family: Desulfobacteraceae
genus: Desulfatibacillum
species: Desulfatibacillum sp.
full scientific name: Desulfatibacillum sp.
strain designation: S2550
type strain: no
Culture and growth conditions
culture medium
- @ref: 4849
- name: DESULFOBACTERIUM MEDIUM (DSMZ Medium 383)
- growth: yes
- link: https://mediadive.dsmz.de/medium/383
- composition: Name: DESULFOBACTERIUM MEDIUM (DSMZ Medium 383; with strain-specific modifications) Composition: NaCl 20.9372 g/l Na2SO4 2.99103 g/l MgCl2 x 6 H2O 2.99103 g/l Valeric acid 0.997009 g/l Na2CO3 0.997009 g/l KCl 0.498504 g/l Na2S x 9 H2O 0.398804 g/l NH4Cl 0.299103 g/l KH2PO4 0.199402 g/l CaCl2 x 2 H2O 0.149551 g/l HCl 0.00249252 g/l FeCl2 x 4 H2O 0.00149551 g/l NaOH 0.000498504 g/l Sodium resazurin 0.000498504 g/l CoCl2 x 6 H2O 0.000189432 g/l MnCl2 x 4 H2O 9.97009e-05 g/l Pyridoxine hydrochloride 9.97009e-05 g/l ZnCl2 6.97906e-05 g/l (DL)-alpha-Lipoic acid 4.98504e-05 g/l Calcium D-(+)-pantothenate 4.98504e-05 g/l p-Aminobenzoic acid 4.98504e-05 g/l Nicotinic acid 4.98504e-05 g/l Riboflavin 4.98504e-05 g/l Thiamine HCl 4.98504e-05 g/l Na2MoO4 x 2 H2O 3.58923e-05 g/l NiCl2 x 6 H2O 2.39282e-05 g/l Folic acid 1.99402e-05 g/l Biotin 1.99402e-05 g/l H3BO3 5.98205e-06 g/l Na2WO4 x 2 H2O 3.98804e-06 g/l Na2SeO3 x 5 H2O 2.99103e-06 g/l CuCl2 x 2 H2O 1.99402e-06 g/l Vitamin B12 9.97009e-07 g/l Distilled water
culture temp
- @ref: 4849
- growth: positive
- type: growth
- temperature: 30
- range: mesophilic
Physiology and metabolism
oxygen tolerance
- @ref: 4849
- oxygen tolerance: anaerobe
Isolation, sampling and environmental information
isolation
- @ref: 4849
- sample type: oil reservoir model column
- country: Norway
- origin.country: NOR
- continent: Europe
isolation source categories
- Cat1: #Engineered
- Cat2: #Industrial
- Cat3: #Oil reservoir
taxonmaps
- @ref: 69479
- File name: preview.99_587.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_127;96_374;97_422;98_481;99_587&stattab=map
- Last taxonomy: Desulfatibacillum
- 16S sequence: AF148141
- Sequence Identity:
- Total samples: 820
- soil counts: 81
- aquatic counts: 692
- animal counts: 30
- plant counts: 17
Sequence information
16S sequences
- @ref: 4849
- description: Delta proteobacterium S2550 16S ribosomal RNA gene, partial sequence
- accession: AF148141
- length: 1519
- database: ena
- NCBI tax ID: 118012
GC content
- @ref: 4849
- GC-content: 68
External links
@ref: 4849
culture collection no.: DSM 12861
straininfo link
- @ref: 73454
- straininfo: 407024
Reference
@id | authors | catalogue | doi/url | title |
---|---|---|---|---|
4849 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 12861) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-12861 | |
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta | |
73454 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID407024.1 | StrainInfo: A central database for resolving microbial strain identifiers |