Strain identifier

BacDive ID: 3945

Type strain: No

Species: Desulfatibacillum sp.

Strain Designation: S2550

Strain history: <- S. Myhr, Univ. Bergen, Norway; S2550 (Desulfostipes sapovorans) <- B. Thorbjørnsen {1995}

NCBI tax ID(s): 2794877 (species)

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General

@ref: 4849

BacDive-ID: 3945

DSM-Number: 12861

keywords: 16S sequence, Bacteria, anaerobe, mesophilic

description: Desulfatibacillum sp. S2550 is an anaerobe, mesophilic bacterium that was isolated from oil reservoir model column.

NCBI tax id

  • NCBI tax id: 2794877
  • Matching level: species

strain history

  • @ref: 4849
  • history: <- S. Myhr, Univ. Bergen, Norway; S2550 (Desulfostipes sapovorans) <- B. Thorbjørnsen {1995}

doi: 10.13145/bacdive3945.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Deltaproteobacteria
  • order: Desulfobacterales
  • family: Desulfobacteraceae
  • genus: Desulfatibacillum
  • species: Desulfatibacillum sp.
  • full scientific name: Desulfatibacillum Cravo-Laureau et al. 2004

@ref: 4849

domain: Bacteria

phylum: Proteobacteria

class: Deltaproteobacteria

order: Desulfobacterales

family: Desulfobacteraceae

genus: Desulfatibacillum

species: Desulfatibacillum sp.

full scientific name: Desulfatibacillum sp.

strain designation: S2550

type strain: no

Culture and growth conditions

culture medium

  • @ref: 4849
  • name: DESULFOBACTERIUM MEDIUM (DSMZ Medium 383)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/383
  • composition: Name: DESULFOBACTERIUM MEDIUM (DSMZ Medium 383; with strain-specific modifications) Composition: NaCl 20.9372 g/l Na2SO4 2.99103 g/l MgCl2 x 6 H2O 2.99103 g/l Valeric acid 0.997009 g/l Na2CO3 0.997009 g/l KCl 0.498504 g/l Na2S x 9 H2O 0.398804 g/l NH4Cl 0.299103 g/l KH2PO4 0.199402 g/l CaCl2 x 2 H2O 0.149551 g/l HCl 0.00249252 g/l FeCl2 x 4 H2O 0.00149551 g/l NaOH 0.000498504 g/l Sodium resazurin 0.000498504 g/l CoCl2 x 6 H2O 0.000189432 g/l MnCl2 x 4 H2O 9.97009e-05 g/l Pyridoxine hydrochloride 9.97009e-05 g/l ZnCl2 6.97906e-05 g/l (DL)-alpha-Lipoic acid 4.98504e-05 g/l Calcium D-(+)-pantothenate 4.98504e-05 g/l p-Aminobenzoic acid 4.98504e-05 g/l Nicotinic acid 4.98504e-05 g/l Riboflavin 4.98504e-05 g/l Thiamine HCl 4.98504e-05 g/l Na2MoO4 x 2 H2O 3.58923e-05 g/l NiCl2 x 6 H2O 2.39282e-05 g/l Folic acid 1.99402e-05 g/l Biotin 1.99402e-05 g/l H3BO3 5.98205e-06 g/l Na2WO4 x 2 H2O 3.98804e-06 g/l Na2SeO3 x 5 H2O 2.99103e-06 g/l CuCl2 x 2 H2O 1.99402e-06 g/l Vitamin B12 9.97009e-07 g/l Distilled water

culture temp

  • @ref: 4849
  • growth: positive
  • type: growth
  • temperature: 30
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 4849
  • oxygen tolerance: anaerobe

Isolation, sampling and environmental information

isolation

  • @ref: 4849
  • sample type: oil reservoir model column
  • country: Norway
  • origin.country: NOR
  • continent: Europe

isolation source categories

  • Cat1: #Engineered
  • Cat2: #Industrial
  • Cat3: #Oil reservoir

taxonmaps

  • @ref: 69479
  • File name: preview.99_587.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_127;96_374;97_422;98_481;99_587&stattab=map
  • Last taxonomy: Desulfatibacillum
  • 16S sequence: AF148141
  • Sequence Identity:
  • Total samples: 820
  • soil counts: 81
  • aquatic counts: 692
  • animal counts: 30
  • plant counts: 17

Sequence information

16S sequences

  • @ref: 4849
  • description: Delta proteobacterium S2550 16S ribosomal RNA gene, partial sequence
  • accession: AF148141
  • length: 1519
  • database: ena
  • NCBI tax ID: 118012

GC content

  • @ref: 4849
  • GC-content: 68

External links

@ref: 4849

culture collection no.: DSM 12861

straininfo link

  • @ref: 73454
  • straininfo: 407024

Reference

@idauthorscataloguedoi/urltitle
4849Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 12861)https://www.dsmz.de/collection/catalogue/details/culture/DSM-12861
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.https://microbeatlas.org/MicrobeAtlas 1.0 beta
73454Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID407024.1StrainInfo: A central database for resolving microbial strain identifiers