Strain identifier

BacDive ID: 376

Type strain: Yes

Species: Bordetella bronchiseptica

Culture col. no.: DSM 13414, ATCC 19395, CCUG 219, CIP 55.110, LMG 1232, NCTC 452, CCM 6082

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General

@ref: 5042

BacDive-ID: 376

DSM-Number: 13414

keywords: human pathogen, mesophilic, aerobe, Bacteria, 16S sequence, genome sequence

description: Bordetella bronchiseptica DSM 13414 is an aerobe, mesophilic human pathogen that was isolated from dog lung.

strain history: <- CCUG <- NCTC <- N. S. Ferry

doi: 10.13145/bacdive376.20201210.5

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/proteobacteria
  • domain: Bacteria
  • phylum: Proteobacteria
  • class: Betaproteobacteria
  • order: Burkholderiales
  • family: Alcaligenaceae
  • genus: Bordetella
  • species: Bordetella bronchiseptica
  • full scientific name: Bordetella bronchiseptica (Ferry 1912) Moreno-López 1952 (Approved Lists 1980)
  • synonyms

    • @ref: 20215
    • synonym: Bacillus bronchisepticus

@ref: 5042

domain: Bacteria

phylum: Proteobacteria

class: Betaproteobacteria

order: Burkholderiales

family: Alcaligenaceae

genus: Bordetella

species: Bordetella bronchiseptica

full scientific name: Bordetella bronchiseptica (Ferry 1912) Moreno-López 1952

type strain: yes

Morphology

colony morphology

  • @ref: 5042
  • type of hemolysis: gamma

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
5042COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)yeshttps://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium693.pdf
5042CASO AGAR (MERCK 105458) (DSMZ Medium 220)yeshttps://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium220.pdf
38384MEDIUM 3 - Columbia agaryesColumbia agar (39.000 g);distilled water (1000.000 ml)

culture temp

@refgrowthtypetemperaturerange
5042positivegrowth37mesophilic
38384positivegrowth30mesophilic
44141positivegrowth37mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 44141
  • oxygen tolerance: aerobe

enzymes

@refvalueactivityec
5042catalase+1.11.1.6
5042cytochrome-c oxidase+1.9.3.1

API 20NE

@refNO3TRPGLU_ FermADH ArgUREESCGELPNPGGLU_ AssimARAMNEMANNAGMALGNTCAPADIMLTCITPACOX
5042----+----------++/-+/-+++
5042----+----------+++/-+++

API ID32E

@refODCADH ArgLDC LysURELARLGAT5KGLIPRPbeta GLUMANMALADOPLEbeta GURMNTINDbeta NAGbeta GALGLUSACLARADARLalpha GLUalpha GALTRERHAINOCELSORalphaMALAspA
44141---+----+-----------------------

API NH

@refPENGLUFRUMALSACODCURELIPPALbeta GALProAGGTIND
5042-+/-----+-+----
5042-++++-+----+-

Isolation, sampling and environmental information

isolation

@refsample typesampling date
5042dog lung
44141Dog lung1912

isolation source categories

Cat1Cat2Cat3
#Host#Mammals#Canidae (Dog)
#Host Body-Site#Organ#Lung

Safety information

risk assessment

  • @ref: 5042
  • pathogenicity human: yes
  • pathogenicity animal: yes
  • biosafety level: 2
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
20218Bordetella bronchiseptica gene for 16S rRNA, partial sequence, strain: NBRC 13691AB6804791456ena518
5042Bordetella bronchiseptica ATCC 19395 16S rRNA, partial sequenceU049481464ena518

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Bordetella bronchiseptica FDAARGOS_176GCA_001559055completencbi518
66792Bordetella bronchiseptica F709GCA_003184465completencbi518
66792Bordetella bronchiseptica A345GCA_004006815completencbi518
66792Bordetella bronchiseptica I943GCA_003186595completencbi518
66792Bordetella bronchiseptica KVNON-570GCA_011305335completencbi518
66792Bordetella bronchiseptica E001GCA_003186205completencbi518
66792Bordetella bronchiseptica D448GCA_004006735completencbi518
66792Bordetella bronchiseptica E010GCA_003186185completencbi518
66792Bordetella bronchiseptica D973GCA_003184485completencbi518
66792Bordetella bronchiseptica D755GCA_003186685completencbi518
66792Bordetella bronchiseptica NCTC10543GCA_900636925completencbi518
66792Bordetella bronchiseptica D987GCA_004006935completencbi518
66792Bordetella bronchiseptica S798GCA_000829175completencbi518
66792Bordetella bronchiseptica E016GCA_004634565completencbi518
66792Bordetella bronchiseptica FDAARGOS_634GCA_008693665completencbi518
66792Bordetella bronchiseptica A310GCA_002859225completencbi518
66792Bordetella bronchiseptica I124GCA_004008095completencbi518
66792Bordetella bronchiseptica I328GCA_001704355completencbi518
66792Bordetella bronchiseptica FDAARGOS_693GCA_012273255chromosomencbi518
66792Bordetella bronchiseptica ATCC 10580GCA_000746565chromosomencbi518
66792Bordetella bronchiseptica NCTC452GCA_900445725contigncbi518
66792Bordetella bronchiseptica NCTC8762GCA_901482585contigncbi518
66792Bordetella bronchiseptica FDAARGOS_543GCA_003938745contigncbi518
66792Bordetella bronchiseptica FDAARGOS_542GCA_003937715contigncbi518
66792Bordetella bronchiseptica NCTC10542GCA_900445815contigncbi518
66792Bordetella bronchiseptica KACC 11941GCA_003428275contigncbi518
66792Bordetella bronchiseptica FMDBb1GCA_008830165contigncbi518
66792Bordetella bronchiseptica LSBSG1GCA_008830705contigncbi518
66792Bordetella bronchiseptica SH05GCA_002750775scaffoldncbi518
66792Bordetella bronchiseptica SH02GCA_002750715scaffoldncbi518
66792Bordetella bronchiseptica SH04GCA_002750725scaffoldncbi518
66792Bordetella bronchiseptica SH03GCA_002750785scaffoldncbi518
66792Bordetella bronchiseptica SH01GCA_002751245scaffoldncbi518
66792Bordetella bronchiseptica KU1201GCA_000974745contigncbi518
66792Bordetella bronchiseptica S798518.12completepatric518
66792Bordetella bronchiseptica strain A310518.42patric518
66792Bordetella bronchiseptica strain A345518.68completepatric518
66792Bordetella bronchiseptica strain ATCC 10580518.13completepatric518
66792Bordetella bronchiseptica strain ATCC:BAA-588D-5518.15completepatric518
66792Bordetella bronchiseptica strain D448518.67completepatric518
66792Bordetella bronchiseptica strain D755518.58completepatric518
66792Bordetella bronchiseptica strain D973518.54completepatric518
66792Bordetella bronchiseptica strain D987518.69completepatric518
66792Bordetella bronchiseptica strain E001518.56completepatric518
66792Bordetella bronchiseptica strain E010518.55completepatric518
66792Bordetella bronchiseptica strain E016518.83completepatric518
66792Bordetella bronchiseptica strain F709518.53completepatric518
66792Bordetella bronchiseptica strain FDAARGOS_542 strain Not applicable518.65wgspatric518
66792Bordetella bronchiseptica strain FDAARGOS_543 strain Not applicable518.66wgspatric518
66792Bordetella bronchiseptica strain FDAARGOS_634 strain Not applicable518.84completepatric518
66792Bordetella bronchiseptica strain FMDBb1518.86wgspatric518
66792Bordetella bronchiseptica strain I124518.70completepatric518
66792Bordetella bronchiseptica strain I328518.17completepatric518
66792Bordetella bronchiseptica strain I943518.57completepatric518
66792Bordetella bronchiseptica strain KACC 11941518.60wgspatric518
66792Bordetella bronchiseptica strain KU1201518.14wgspatric518
66792Bordetella bronchiseptica strain LSBSG1518.87wgspatric518
66792Bordetella bronchiseptica strain NCTC10542518.62wgspatric518
66792Bordetella bronchiseptica strain NCTC10543518.71completepatric518
66792Bordetella bronchiseptica strain NCTC452518.61wgspatric518
66792Bordetella bronchiseptica strain NCTC8762518.85wgspatric518
66792Bordetella bronchiseptica strain S87518.33plasmidpatric518
66792Bordetella bronchiseptica strain SH01518.32wgspatric518
66792Bordetella bronchiseptica strain SH02518.28wgspatric518
66792Bordetella bronchiseptica strain SH03518.31wgspatric518
66792Bordetella bronchiseptica strain SH04518.29wgspatric518
66792Bordetella bronchiseptica strain SH05518.30wgspatric518

External links

@ref: 5042

culture collection no.: DSM 13414, ATCC 19395, CCUG 219, CIP 55.110, LMG 1232, NCTC 452, CCM 6082

straininfo link

@refpassport
20218http://www.straininfo.net/strains/163669
20218http://www.straininfo.net/strains/5603
20218http://www.straininfo.net/strains/5605
20218http://www.straininfo.net/strains/231229
20218http://www.straininfo.net/strains/5602
20218http://www.straininfo.net/strains/5607

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
5042Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 13414)https://www.dsmz.de/collection/catalogue/details/culture/DSM-13414
20215D.Gleim, M.Kracht, N.Weiss et. al.http://www.dsmz.de/bacterial-diversity/prokaryotic-nomenclature-up-to-date.htmlProkaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
38384Curators of the CIPhttps://brclims.pasteur.fr/brcWeb/souche/detail/1/8544
44141Curators of the CCUGCulture Collection University of Gothenburg (CCUG) (CCUG 219)https://www.ccug.se/strain?id=219
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)