Strain identifier
BacDive ID: 3372
Type strain: 
Species: Cystobacter velatus
Strain Designation: Cb v34
Strain history: DSM 14718 <-- H. Reichenbach Cb v34.
NCBI tax ID(s): 394094 (species)
version 9 (current version)
General
@ref: 5503
BacDive-ID: 3372
DSM-Number: 14718
keywords: 16S sequence, Bacteria
description: Cystobacter velatus Cb v34 is a bacterium that builds a fruiting body and was isolated from soil with rotting wood.
NCBI tax id
- NCBI tax id: 394094
- Matching level: species
strain history
| @ref | history |
|---|---|
| 5503 | <- H. Reichenbach; Cb v34 |
| 67770 | DSM 14718 <-- H. Reichenbach Cb v34. |
doi: 10.13145/bacdive3372.20240510.9
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Deltaproteobacteria
- order: Myxococcales
- family: Archangiaceae
- genus: Cystobacter
- species: Cystobacter velatus
- full scientific name: Cystobacter velatus Reichenbach 2007
@ref: 5503
domain: Bacteria
phylum: Proteobacteria
class: Deltaproteobacteria
order: Myxococcales
family: Archangiaceae
genus: Cystobacter
species: Cystobacter velatus
full scientific name: Cystobacter velatus Reichenbach 2007
strain designation: Cb v34
type strain: yes
Morphology
multicellular morphology
- @ref: 18281
- forms multicellular complex: yes
- complex name: fruiting body
Culture and growth conditions
culture medium
| @ref | name | growth | link | composition |
|---|---|---|---|---|
| 5503 | AGAR WITH E. COLI AS FEED (DSMZ Medium 942) | yes | https://mediadive.dsmz.de/medium/942 | Name: AGAR WITH E. COLI AS FEED (DSMZ Medium 942) Composition: Agar 15.0 g/l CaCl2 x 2 H2O 1.0 g/l Distilled water |
| 5503 | VY/2 AGAR (DSMZ Medium 9) | yes | https://mediadive.dsmz.de/medium/9 | Name: VY/2 AGAR (DSMZ Medium 9) Composition: Agar 15.0 g/l Baker's yeast 5.0 g/l CaCl2 x 2 H2O 1.36 g/l Vitamin B12 0.0005 g/l Distilled water |
culture temp
| @ref | growth | type | temperature |
|---|---|---|---|
| 5503 | positive | growth | 30 |
| 67770 | positive | growth | 30 |
Isolation, sampling and environmental information
isolation
| @ref | sample type | geographic location | country | origin.country | continent |
|---|---|---|---|---|---|
| 5503 | soil with rotting wood | Rajasthan | India | IND | Asia |
| 67770 | Soil with bark and wood | India | IND | Asia |
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Environmental | #Terrestrial | #Soil |
| #Host | #Plants | #Decomposing plant |
| #Host Body Product | #Plant | #Timber |
taxonmaps
- @ref: 69479
- File name: preview.99_1427.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_211;96_740;97_958;98_1127;99_1427&stattab=map
- Last taxonomy: Cystobacter
- 16S sequence: DQ768115
- Sequence Identity:
- Total samples: 13071
- soil counts: 8866
- aquatic counts: 647
- animal counts: 1003
- plant counts: 2555
Safety information
risk assessment
- @ref: 5503
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 5503
- description: Cystobacter velatus strain DSM 14718 16S ribosomal RNA gene, partial sequence
- accession: DQ768115
- length: 1491
- database: nuccore
- NCBI tax ID: 394094
External links
@ref: 5503
culture collection no.: DSM 14718, CIP 109132, JCM 12628
straininfo link
- @ref: 72885
- straininfo: 215425
Reference
| @id | authors | catalogue | doi/url | title |
|---|---|---|---|---|
| 5503 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 14718) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-14718 | |
| 18281 | Reichenbach, H. | Collection description and documentation of myxobacteria by H. Reichenbach, HZI (formerly GBF); Collection curr. located at the DSMZ | ||
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta | |
| 72885 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID215425.1 | StrainInfo: A central database for resolving microbial strain identifiers |