Strain identifier

BacDive ID: 3192

Type strain: Yes

Species: Corynebacterium felinum

Strain Designation: M714/95/5, M714-95-5, 980915

Strain history: CIP <- 2000, CCUG <- MD Collins, IFR, Reading, UK: strain 980915 <- G. Foster, Inverness, UK: strain M714-95-5

NCBI tax ID(s): 131318 (species)

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General

@ref: 11832

BacDive-ID: 3192

DSM-Number: 44508

keywords: genome sequence, 16S sequence, Bacteria, facultative anaerobe, mesophilic, Gram-positive

description: Corynebacterium felinum M714/95/5 is a facultative anaerobe, mesophilic, Gram-positive bacterium that was isolated from dead Scottisch wild cat .

NCBI tax id

  • NCBI tax id: 131318
  • Matching level: species

strain history

@refhistory
11832<- M. D. Collins, CCUG
67770CCUG 39943 <-- M. D. Collins <-- G. Foster M714/95/5.
119297CIP <- 2000, CCUG <- MD Collins, IFR, Reading, UK: strain 980915 <- G. Foster, Inverness, UK: strain M714-95-5

doi: 10.13145/bacdive3192.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Mycobacteriales
  • family: Corynebacteriaceae
  • genus: Corynebacterium
  • species: Corynebacterium felinum
  • full scientific name: Corynebacterium felinum Collins et al. 2001

@ref: 11832

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Corynebacteriaceae

genus: Corynebacterium

species: Corynebacterium felinum

full scientific name: Corynebacterium felinum Collins et al. 2001

strain designation: M714/95/5, M714-95-5, 980915

type strain: yes

Morphology

cell morphology

@refgram stainmotilitycell shape
23371positiveno
119297positivenorod-shaped

colony morphology

@reftype of hemolysismedium used
23371gammaColumbia blood agar base supplemented with 5% defibrinated sheep blood
119297

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
11832TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)yeshttps://mediadive.dsmz.de/medium/535Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water
11832COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)yeshttps://mediadive.dsmz.de/medium/693Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base
23371Columbia blood agar base supplemented with 5% defibrinated sheep bloodyes
39692MEDIUM 72- for trypto casein soja agaryesDistilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g)
119297CIP Medium 72yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=72

culture temp

@refgrowthtypetemperaturerange
19663positiveoptimum37mesophilic
11832positivegrowth37mesophilic
23371positivegrowth37mesophilic
39692positivegrowth37mesophilic
55002positivegrowth30-37mesophilic
67770positivegrowth37mesophilic
119297positivegrowth15-41
119297nogrowth10psychrophilic
119297nogrowth45thermophilic

Physiology and metabolism

oxygen tolerance

@refoxygen tolerance
23371facultative anaerobe
55002aerobe
119297obligate aerobe

spore formation

  • @ref: 23371
  • spore formation: no

halophily

  • @ref: 119297
  • salt: NaCl
  • growth: positive
  • tested relation: growth
  • concentration: 0-10 %

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
2337165327D-xylose-builds acid from
2337117716lactose-builds acid from
2337129864mannitol-builds acid from
23371506227N-acetylglucosamine-builds acid from
2337117992sucrose-builds acid from
233714853esculin-hydrolysis
233715291gelatin-hydrolysis
2337116199urea-hydrolysis
2337117632nitrate-reduction
2337117234glucose+builds acid from
2337117306maltose+builds acid from
2337133942ribose+builds acid from
11929716947citrate-carbon source
1192974853esculin-hydrolysis
119297606565hippurate+hydrolysis
11929717632nitrate-reduction
11929716301nitrite-reduction
11929717632nitrate-respiration
6837917632nitrate-reduction
683794853esculin-hydrolysis
6837916199urea+hydrolysis
683795291gelatin-hydrolysis
6837917634D-glucose+fermentation
6837916988D-ribose-fermentation
6837965327D-xylose-fermentation
6837916899D-mannitol-fermentation
6837917306maltose-fermentation
6837917716lactose-fermentation
6837917992sucrose-fermentation
6837928087glycogen-fermentation

antibiotic resistance

  • @ref: 119297
  • metabolite: 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)
  • is antibiotic: yes
  • is sensitive: yes
  • is resistant: no

metabolite production

  • @ref: 119297
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

@refChebi-IDmetabolitevoges-proskauer-testmethylred-test
11929715688acetoin-
11929717234glucose+

enzymes

@refvalueactivityec
23371acid phosphatase-3.1.3.2
23371alkaline phosphatase-3.1.3.1
23371alpha-fucosidase-3.2.1.51
23371alpha-galactosidase-3.2.1.22
23371alpha-glucosidase+3.2.1.20
23371alpha-mannosidase-3.2.1.24
23371beta-galactosidase-3.2.1.23
23371beta-glucosidase-3.2.1.21
23371beta-glucuronidase-3.2.1.31
23371catalase+1.11.1.6
23371chymotrypsin-3.4.4.5
23371esterase (C 4)-
23371esterase lipase (C 8)-
23371leucine arylamidase+3.4.11.1
23371lipase (C 14)-
23371phosphoamidase-3.9.1.1
23371pyrazinamidase+3.5.1.B15
23371pyrrolidonyl arylamidase+3.4.19.3
23371trypsin-3.4.21.4
23371valine arylamidase-
68382alpha-fucosidase-3.2.1.51
68382alpha-mannosidase-3.2.1.24
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382beta-glucosidase-3.2.1.21
68382beta-glucuronidase-3.2.1.31
68382beta-galactosidase-3.2.1.23
68382alpha-galactosidase-3.2.1.22
68382alpha-chymotrypsin-3.4.21.1
68382trypsin+3.4.21.4
68382valine arylamidase+
68382leucine arylamidase+3.4.11.1
68382lipase (C 14)-
68382esterase lipase (C 8)+
68382esterase (C 4)+
68382alkaline phosphatase-3.1.3.1
68379gelatinase-
68379urease+3.5.1.5
68379beta-glucosidase-3.2.1.21
68379N-acetyl-beta-glucosaminidase-3.2.1.52
68379alpha-glucosidase-3.2.1.20
68379beta-galactosidase-3.2.1.23
68379beta-glucuronidase-3.2.1.31
68379alkaline phosphatase-3.1.3.1
68379pyrrolidonyl arylamidase+3.4.19.3
68379pyrazinamidase-3.5.1.B15
119297oxidase-
119297beta-galactosidase-3.2.1.23
119297alcohol dehydrogenase-1.1.1.1
119297gelatinase-
119297amylase-
119297DNase-
119297caseinase-3.4.21.50
119297catalase+1.11.1.6
119297tween esterase+
119297gamma-glutamyltransferase+2.3.2.2
119297lecithinase-
119297lipase-
119297lysine decarboxylase-4.1.1.18
119297ornithine decarboxylase-4.1.1.17
119297phenylalanine ammonia-lyase-4.3.1.24
119297tryptophan deaminase-
119297urease-3.5.1.5

API coryne

@refNITPYZPYRAPALbeta GURbeta GALalpha GLUbeta NAGESCUREGELGLURIBXYLMANMALLACSACGLYG
19663--+------+-+-------

API zym

@refAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- FucosidaseControl
19663-++-++++-----------
119297-++-++-+-++---+-----

API biotype100

@refGLUFRUGALTREMNESBEMELSACRAFMTEMALLACLTEMbGaMaGaCELGENMbGuESCRIBARAXYLPLERHAFUCMLZDARLLARLXLTDULTAGGLYINOMANMTLTURSORADOHBGLYXERYMDG3MDGSATMUCLTATDTATMTATDMLTLMLTCATETATETTECITGRTGAT2KG5KGTRYNAGGNTPACPATpOBEQATGTEmOBEBATPPATCMTTGEBETPCEABTHINLATCAPCYTHISSUCFUMGREGYTAVTETNTTNGLNITA3OBUAPTGTTPRODALALALASERMNTPROPTYR2KT
119297++--+----++--------------------------------------++--------+--------+------+---++-----+------------

Isolation, sampling and environmental information

isolation

@refsample typehost speciessampling dategeographic locationcountryorigin.countrycontinent
11832dead Scottisch wild cat (Felis sylvestris)Felis sylvestris
23371a Scottish wild cat that had died from feline influenza
55002Scottish wild cat,Felis sylvestris1995InvernessUnited KingdomGBREurope
67770Dead Scottish wild cat (Felis sylvestris)Felis sylvestris
119297Scottish wild cat, Fellis silvestrisInvernessUnited KingdomGBREurope

isolation source categories

Cat1Cat2Cat3
#Infection#Disease
#Host#Other#Decomposing animal
#Host#Mammals#Felidae (Cat)

Safety information

risk assessment

@refbiosafety levelbiosafety level commentpathogenicity animal
196632Risk group (German classification)
118321Risk group (German classification)yes, in single cases
1192972Risk group (French classification)

Sequence information

16S sequences

  • @ref: 11832
  • description: Corynebacterium felinum partial 16S rRNA gene, strain CCUG 39943
  • accession: AJ401282
  • length: 1415
  • database: ena
  • NCBI tax ID: 131318

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Corynebacterium felinum DSM 445082923453845draftimg131318
66792Corynebacterium felinum CCUG 39943GCA_029383185scaffoldncbi131318

External links

@ref: 11832

culture collection no.: DSM 44508, CCUG 39943, CIP 106740, ATCC BAA 468, JCM 12103, VTT E-072718

straininfo link

  • @ref: 72708
  • straininfo: 50664

literature

topicPubmed-IDtitleauthorsjournalDOIyearmeshtopic2
Phylogeny11491332Corynebacterium testudinoris sp. nov., from a tortoise, and Corynebacterium felinum sp. nov., from a Scottish wild cat.Collins MD, Hoyles L, Hutson RA, Foster G, Falsen EInt J Syst Evol Microbiol10.1099/00207713-51-4-13492001Animals, Animals, Wild/microbiology, Cats/*microbiology, Corynebacterium/*classification/genetics/*isolation & purification/metabolism, Molecular Sequence Data, Phylogeny, RNA, Bacterial/genetics, RNA, Ribosomal, 16S/genetics, Scotland, Species Specificity, Terminology as Topic, Turtles/*microbiologyGenetics
Phylogeny25404484Corynebacterium atrinae sp. nov., isolated from the gastrointestinal tract of a pen shell, Atrina pectinata.Kim PS, Shin NR, Hyun DW, Kim JY, Whon TW, Oh SJ, Bae JWInt J Syst Evol Microbiol10.1099/ijs.0.067587-02014Animals, Bacterial Typing Techniques, Base Composition, Bivalvia/*microbiology, Corynebacterium/*classification/genetics/isolation & purification, DNA, Bacterial/genetics, Diaminopimelic Acid/chemistry, Fatty Acids/chemistry, Gastrointestinal Tract/*microbiology, Molecular Sequence Data, Nucleic Acid Hybridization/genetics, Peptidoglycan/chemistry, Phospholipids/chemistry, *Phylogeny, RNA, Ribosomal, 16S/genetics, Republic of Korea, Sequence Analysis, DNA, Vitamin K 2/analogs & derivatives/chemistryGenetics

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
11832Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 44508)https://www.dsmz.de/collection/catalogue/details/culture/DSM-44508
19663Wink, J.http://www.dsmz.de/microorganisms/wink_pdf/DSM44408.pdfCompendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
23371M D Collins, L Hoyles, R A Hutson, G Foster, E Falsen10.1099/00207713-51-4-1349Corynebacterium testudinoris sp. nov., from a tortoise, and Corynebacterium felinum sp. nov., from a Scottish wild cat.IJSEM 51: 1349-1352 200111491332
39692Curators of the CIPhttps://brclims.pasteur.fr/brcWeb/souche/detail/1/18904
55002Curators of the CCUGCulture Collection University of Gothenburg (CCUG) (CCUG 39943)https://www.ccug.se/strain?id=39943
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
68379Automatically annotated from API Coryne
68382Automatically annotated from API zym
72708Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID50664.1StrainInfo: A central database for resolving microbial strain identifiers
119297Curators of the CIPCollection of Institut Pasteur (CIP 106740)https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20106740