Strain identifier
BacDive ID: 3157
Type strain: 
Species: Corynebacterium glucuronolyticum
Strain Designation: Riegel B 86470
Strain history: <- CCUG <- P. Riegel, ULP Strasbourg, B 86470
NCBI tax ID(s): 39791 (species)
General
@ref: 11646
BacDive-ID: 3157
DSM-Number: 44289
keywords: genome sequence, Bacteria, mesophilic
description: Corynebacterium glucuronolyticum Riegel B 86470 is a mesophilic bacterium of the family Corynebacteriaceae.
NCBI tax id
- NCBI tax id: 39791
- Matching level: species
strain history
- @ref: 11646
- history: <- CCUG <- P. Riegel, ULP Strasbourg, B 86470
doi: 10.13145/bacdive3157.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Mycobacteriales
- family: Corynebacteriaceae
- genus: Corynebacterium
- species: Corynebacterium glucuronolyticum
- full scientific name: Corynebacterium glucuronolyticum Funke et al. 1995
synonyms
- @ref: 20215
- synonym: Corynebacterium seminale
@ref: 11646
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Corynebacteriaceae
genus: Corynebacterium
species: Corynebacterium glucuronolyticum
full scientific name: Corynebacterium glucuronolyticum Funke et al. 1995 emend. Nouioui et al. 2018
strain designation: Riegel B 86470
type strain: no
Morphology
cell morphology
| @ref | motility | confidence | gram stain |
|---|---|---|---|
| 69480 | no | 96.684 | |
| 69480 | 100 | positive |
Culture and growth conditions
culture medium
- @ref: 11646
- name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)
- growth: yes
- link: https://mediadive.dsmz.de/medium/535
- composition: Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535; with strain-specific modifications) Composition: Defibrinated sheep blood 50.0 g/l Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water
culture temp
- @ref: 11646
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Physiology and metabolism
spore formation
| @ref | spore formation | confidence |
|---|---|---|
| 69481 | no | 100 |
| 69480 | no | 99.969 |
Safety information
risk assessment
- @ref: 11646
- biosafety level: 2
- biosafety level comment: Risk group (German classification)
Sequence information
Genome sequences
- @ref: 66792
- description: Corynebacterium glucuronolyticum strain FDAARGOS_1191
- accession: 39791.13
- assembly level: complete
- database: patric
- NCBI tax ID: 39791
Genome-based predictions
predictions
| trait | prediction | confidence | training_data |
|---|---|---|---|
| spore-forming | no | 100 | no |
| gram-positive | yes | 92.462 | no |
| anaerobic | no | 96.84 | no |
| halophile | no | 69.848 | no |
| spore-forming | no | 93.171 | no |
| glucose-util | yes | 87.518 | no |
| aerobic | no | 85.053 | no |
| motile | no | 94.816 | no |
| flagellated | no | 97.653 | no |
| thermophile | no | 89.918 | yes |
| glucose-ferment | yes | 69.997 | no |
External links
@ref: 11646
culture collection no.: DSM 44289, CCUG 34890, IBS B 86470
straininfo link
- @ref: 72673
- straininfo: 50551
Reference
| @id | authors | catalogue | doi/url | title |
|---|---|---|---|---|
| 11646 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 44289) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-44289 | |
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | |
| 69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | |
| 69481 | Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch | 10.21203/rs.3.rs-2527258/v1 | Predictions based on the model GenomeNet Sporulation v. 1 | |
| 72673 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID50551.1 | StrainInfo: A central database for resolving microbial strain identifiers |