Strain identifier

BacDive ID: 3140

Type strain: No

Species: Corynebacterium jeikeium

Strain Designation: D760

Strain history: <- ATCC; ATCC 43216 <- D. G. Hollis; D760 <- NIH;

NCBI tax ID(s): 38289 (species)

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General

@ref: 2989

BacDive-ID: 3140

DSM-Number: 7112

keywords: 16S sequence, Bacteria, mesophilic

description: Corynebacterium jeikeium D760 is a mesophilic bacterium that was isolated from blood.

NCBI tax id

  • NCBI tax id: 38289
  • Matching level: species

strain history

  • @ref: 2989
  • history: <- ATCC; ATCC 43216 <- D. G. Hollis; D760 <- NIH;

doi: 10.13145/bacdive3140.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Mycobacteriales
  • family: Corynebacteriaceae
  • genus: Corynebacterium
  • species: Corynebacterium jeikeium
  • full scientific name: Corynebacterium jeikeium Jackman et al. 1988

@ref: 2989

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Corynebacteriaceae

genus: Corynebacterium

species: Corynebacterium jeikeium

full scientific name: Corynebacterium jeikeium Jackman et al. 1988 emend. Nouioui et al. 2018

strain designation: D760

type strain: no

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
2989TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)yeshttps://mediadive.dsmz.de/medium/92Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92; with strain-specific modifications) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Tween 80 2.0 g/l Distilled water
2989COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)yeshttps://mediadive.dsmz.de/medium/693Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base

culture temp

  • @ref: 2989
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837917632nitrate-reduction
683794853esculin-hydrolysis
6837916199urea-hydrolysis
683795291gelatin-hydrolysis
6837917634D-glucose+fermentation
6837916988D-ribose+fermentation
6837965327D-xylose-fermentation
6837916899D-mannitol-fermentation
6837917306maltose-fermentation
6837917716lactose-fermentation
6837917992sucrose-fermentation
6837928087glycogen-fermentation

enzymes

@refvalueactivityec
68379catalase+1.11.1.6
68379gelatinase-
68379urease-3.5.1.5
68379beta-glucosidase-3.2.1.21
68379N-acetyl-beta-glucosaminidase-3.2.1.52
68379alpha-glucosidase-3.2.1.20
68379beta-galactosidase-3.2.1.23
68379beta-glucuronidase-3.2.1.31
68379alkaline phosphatase+3.1.3.1
68379pyrrolidonyl arylamidase-3.4.19.3
68379pyrazinamidase+3.5.1.B15

API coryne

@refNITPYZPYRAPALbeta GURbeta GALalpha GLUbeta NAGESCUREGELControlGLURIBXYLMANMALLACSACGLYGCAT
2989-+-+--------++------+

Isolation, sampling and environmental information

isolation

  • @ref: 2989
  • sample type: blood

isolation source categories

Cat1Cat2Cat3
#Host Body Product#Fluids#Blood
#Infection#Patient

Safety information

risk assessment

  • @ref: 2989
  • biosafety level: 2
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 20218
  • description: Corynebacterium jeikeium 16S ribosomal RNA gene, complete sequence
  • accession: U87816
  • length: 1450
  • database: ena
  • NCBI tax ID: 38289

External links

@ref: 2989

culture collection no.: DSM 7112, ATCC 43216

straininfo link

  • @ref: 72657
  • straininfo: 46829

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
2989Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 7112)https://www.dsmz.de/collection/catalogue/details/culture/DSM-7112
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
68379Automatically annotated from API Coryne
72657Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID46829.1StrainInfo: A central database for resolving microbial strain identifiers