Strain identifier

BacDive ID: 3001

Type strain: No

Species: Variovorax paradoxus

Strain Designation: 14-O-1, 353

Strain history: IAM 13536 <-- DSM 646 <-- ATCC 17715 <-- R. Y. Stanier 353 <-- D. H. Davis 14-0-1.

NCBI tax ID(s): 34073 (species)

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General

@ref: 345

BacDive-ID: 3001

DSM-Number: 646

keywords: Bacteria, mesophilic

description: Variovorax paradoxus 14-O-1 is a mesophilic bacterium that was isolated from soil.

NCBI tax id

  • NCBI tax id: 34073
  • Matching level: species

strain history

@refhistory
345<- ATCC <- R.Y. Stanier, 353 <- D.H. Davis, 14-O-1
67770IAM 13536 <-- DSM 646 <-- ATCC 17715 <-- R. Y. Stanier 353 <-- D. H. Davis 14-0-1.

doi: 10.13145/bacdive3001.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Betaproteobacteria
  • order: Burkholderiales
  • family: Comamonadaceae
  • genus: Variovorax
  • species: Variovorax paradoxus
  • full scientific name: Variovorax paradoxus (Davis 1969) Willems et al. 1991

  • synonyms

    • @ref: 20215
    • synonym: Alcaligenes paradoxus

@ref: 345

domain: Bacteria

phylum: Proteobacteria

class: Betaproteobacteria

order: Burkholderiales

family: Comamonadaceae

genus: Variovorax

species: Variovorax paradoxus

full scientific name: Variovorax paradoxus (Davis 1969) Willems et al. 1991

strain designation: 14-O-1, 353

type strain: no

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
345NUTRIENT AGAR (DSMZ Medium 1)yeshttps://mediadive.dsmz.de/medium/1Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water
345MINERAL MEDIUM FOR CHEMOLITHOTROPHIC GROWTH (H-3) (DSMZ Medium 81)yeshttps://mediadive.dsmz.de/medium/81Name: MINERAL MEDIUM FOR CHEMOLITHOTROPHIC GROWTH (H-3) (DSMZ Medium 81) Composition: Agar 20.1005 g/l Na2HPO4 x 2 H2O 2.91457 g/l KH2PO4 2.31156 g/l NH4Cl 1.00503 g/l MgSO4 x 7 H2O 0.502512 g/l Ferric ammonium citrate 0.0502513 g/l CaCl2 x 2 H2O 0.0100503 g/l NaVO3 x H2O 0.00502512 g/l Calcium pantothenate 0.00251256 g/l Pyridoxine hydrochloride 0.00251256 g/l Nicotinic acid 0.00251256 g/l Thiamine-HCl x 2 H2O 0.00251256 g/l H3BO3 0.00150754 g/l CoCl2 x 6 H2O 0.00100503 g/l Riboflavin 0.000502513 g/l ZnSO4 x 7 H2O 0.000502513 g/l MnCl2 x 4 H2O 0.000150754 g/l Na2MoO4 x 2 H2O 0.000150754 g/l NiCl2 x 6 H2O 0.000100503 g/l CuCl2 x 2 H2O 5.02513e-05 g/l Vitamin B12 5.02513e-05 g/l Folic acid 1.00503e-05 g/l Biotin 5.02513e-06 g/l Distilled water

culture temp

@refgrowthtypetemperaturerange
345positivegrowth30mesophilic
67770positivegrowth25mesophilic

Isolation, sampling and environmental information

isolation

@refsample typegeographic locationcountryorigin.countrycontinent
345soilCalifornia, BerkeleyUSAUSANorth America
46383Soil

isolation source categories

  • Cat1: #Environmental
  • Cat2: #Terrestrial
  • Cat3: #Soil

Safety information

risk assessment

  • @ref: 345
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

External links

@ref: 345

culture collection no.: CCUG 15917, DSM 646, ATCC 17715, JCM 20896, IAM 13536, LMG 3573

straininfo link

  • @ref: 72523
  • straininfo: 13862

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
345Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 646)https://www.dsmz.de/collection/catalogue/details/culture/DSM-646
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
46383Curators of the CCUGCulture Collection University of Gothenburg (CCUG) (CCUG 15917)https://www.ccug.se/strain?id=15917
66794Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg10.1093/nar/gkaa1025BRENDA, the ELIXIR core data resource in 2021: new developments and updatesNucleic Acids Res. 49: D498-D508 202033211880
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
72523Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID13862.1StrainInfo: A central database for resolving microbial strain identifiers