Strain identifier
BacDive ID: 2990
Type strain: 
Species: Rhodoferax fermentans
Strain Designation: Strain B2C
Strain history: <- J. H. Klemme
NCBI tax ID(s): 28066 (species)
version 8.1 (current version)
General
@ref: 3816
BacDive-ID: 2990
DSM-Number: 10139
keywords: Bacteria, anaerobe, mesophilic
description: Rhodoferax fermentans Strain B2C is an anaerobe, mesophilic bacterium that was isolated from sediment of eutrophic pond.
NCBI tax id
- NCBI tax id: 28066
- Matching level: species
strain history
- @ref: 3816
- history: <- J. H. Klemme
doi: 10.13145/bacdive2990.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Betaproteobacteria
- order: Burkholderiales
- family: Comamonadaceae
- genus: Rhodoferax
- species: Rhodoferax fermentans
- full scientific name: Rhodoferax fermentans Hiraishi et al. 1992
@ref: 3816
domain: Bacteria
phylum: Proteobacteria
class: Betaproteobacteria
order: Burkholderiales
family: Comamonadaceae
genus: Rhodoferax
species: Rhodoferax fermentans
full scientific name: Rhodoferax fermentans Hiraishi et al. 1992
strain designation: Strain B2C
type strain: no
Culture and growth conditions
culture medium
- @ref: 3816
- name: RHODOSPIRILLACEAE MEDIUM (modified) (DSMZ Medium 27)
- growth: yes
- link: https://mediadive.dsmz.de/medium/27
- composition: Name: RHODOSPIRILLACEAE MEDIUM (modified) (DSMZ Medium 27; with strain-specific modifications) Composition: Disodium succinate 1.0 g/l KH2PO4 0.5 g/l Yeast extract 0.5 g/l Ammonium acetate 0.5 g/l MgSO4 x 7 H2O 0.4 g/l NH4Cl 0.4 g/l NaCl 0.4 g/l L-Cysteine HCl 0.3 g/l CaCl2 x 2 H2O 0.05 g/l Resazurin 0.005 g/l Fe(III) citrate 0.005 g/l H3BO3 0.0003 g/l CoCl2 x 6 H2O 0.0002 g/l ZnSO4 x 7 H2O 0.0001 g/l MnCl2 x 4 H2O 3e-05 g/l Na2MoO4 x 2 H2O 3e-05 g/l NiCl2 x 6 H2O 2e-05 g/l CuCl2 x 2 H2O 1e-05 g/l Vitamin B12 Distilled water
culture temp
- @ref: 3816
- growth: positive
- type: growth
- temperature: 28
- range: mesophilic
Physiology and metabolism
oxygen tolerance
- @ref: 3816
- oxygen tolerance: anaerobe
Isolation, sampling and environmental information
isolation
- @ref: 3816
- sample type: sediment of eutrophic pond
- geographic location: Bonn
- country: Germany
- origin.country: DEU
- continent: Europe
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Environmental | #Aquatic | #Pond (small) |
| #Environmental | #Aquatic | #Sediment |
Safety information
risk assessment
- @ref: 3816
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
GC content
- @ref: 3816
- GC-content: 59.8
External links
@ref: 3816
culture collection no.: DSM 10139
straininfo link
- @ref: 72512
- straininfo: 48760
Reference
| @id | authors | catalogue | doi/url | title | journal | pubmed |
|---|---|---|---|---|---|---|
| 3816 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 10139) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-10139 | |||
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
| 66794 | Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg | 10.1093/nar/gkaa1025 | BRENDA, the ELIXIR core data resource in 2021: new developments and updates | Nucleic Acids Res. 49: D498-D508 2020 | 33211880 | |
| 72512 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID48760.1 | StrainInfo: A central database for resolving microbial strain identifiers |