Strain identifier
BacDive ID: 2921
Type strain: 
Species: Comamonas testosteroni
Strain Designation: 31
Strain history: J. Tamaoka KS 0105 <-- NCIB 9683 <-- T. Wiken.
NCBI tax ID(s): 285 (species)
General
@ref: 12680
BacDive-ID: 2921
DSM-Number: 50241
keywords: 16S sequence, Bacteria, human pathogen
description: Comamonas testosteroni 31 is a human pathogen that was isolated from soil, enrichment with bromosuccinate.
NCBI tax id
- NCBI tax id: 285
- Matching level: species
strain history
| @ref | history |
|---|---|
| 12680 | <- ICPB <- Lab. Microbiol. Delft <- L.E. den Dooren de Jong; 31 |
| 67770 | J. Tamaoka KS 0105 <-- NCIB 9683 <-- T. Wiken. |
doi: 10.13145/bacdive2921.20240510.9
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Betaproteobacteria
- order: Burkholderiales
- family: Comamonadaceae
- genus: Comamonas
- species: Comamonas testosteroni
- full scientific name: Comamonas testosteroni (Marcus and Talalay 1956) Tamaoka et al. 1987
synonyms
- @ref: 20215
- synonym: Pseudomonas testosteroni
@ref: 12680
domain: Bacteria
phylum: Proteobacteria
class: Betaproteobacteria
order: Burkholderiales
family: Comamonadaceae
genus: Comamonas
species: Comamonas testosteroni
full scientific name: Comamonas testosteroni (Marcus and Talalay 1956) Tamaoka et al. 1987 emend. Willems et al. 1991
strain designation: 31
type strain: no
Culture and growth conditions
culture medium
- @ref: 12680
- name: NUTRIENT AGAR (DSMZ Medium 1)
- growth: yes
- link: https://mediadive.dsmz.de/medium/1
- composition: Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water
culture temp
| @ref | growth | type | temperature |
|---|---|---|---|
| 12680 | positive | growth | 30 |
| 67770 | positive | growth | 30 |
Physiology and metabolism
observation
- @ref: 67770
- observation: quinones: Q-8
Isolation, sampling and environmental information
isolation
| @ref | sample type |
|---|---|
| 12680 | soil, enrichment with bromosuccinate |
| 67770 | Soil |
isolation source categories
- Cat1: #Environmental
- Cat2: #Terrestrial
- Cat3: #Soil
taxonmaps
- @ref: 69479
- File name: preview.99_294.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_1;96_202;97_220;98_249;99_294&stattab=map
- Last taxonomy: Comamonas
- 16S sequence: LC379086
- Sequence Identity:
- Total samples: 45208
- soil counts: 5571
- aquatic counts: 17183
- animal counts: 18603
- plant counts: 3851
Safety information
risk assessment
- @ref: 12680
- pathogenicity human: yes, in single cases
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
| @ref | description | accession | length | database | NCBI tax ID |
|---|---|---|---|---|---|
| 67770 | Comamonas testosteroni gene for 16S rRNA, partial sequence, strain: JCM 6224 | LC379086 | 1455 | nuccore | 285 |
| 124043 | Comamonas testosteroni JCM 13049 gene for 16S rRNA, partial sequence. | LC507946 | 1455 | nuccore | 285 |
GC content
- @ref: 67770
- GC-content: 62
- method: high performance liquid chromatography (HPLC)
External links
@ref: 12680
culture collection no.: DSM 50241, ATCC 15666, ICPB 2738-16, JCM 6224, JCM 13049, NCCB 33024, NCIMB 9683
straininfo link
- @ref: 72444
- straininfo: 36441
Reference
| @id | authors | catalogue | doi/url | title |
|---|---|---|---|---|
| 12680 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 50241) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-50241 | |
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta | |
| 72444 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID36441.1 | StrainInfo: A central database for resolving microbial strain identifiers | |
| 124043 | Dr. Isabel Schober, Dr. Julia Koblitz | Data extracted from sequence databases, automatically matched based on designation and taxonomy |