Strain identifier

BacDive ID: 2910

Type strain: No

Species: Comamonas testosteroni

Strain Designation: R-10-Z

Strain history: IAM 1152 <-- K. Arima et al. R-10-2.

NCBI tax ID(s): 285 (species)

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General

@ref: 770

BacDive-ID: 2910

DSM-Number: 1455

keywords: 16S sequence, Bacteria, amino acid production, human pathogen

description: Comamonas testosteroni R-10-Z is a human pathogen that produces amino acids.

NCBI tax id

  • NCBI tax id: 285
  • Matching level: species

strain history

@refhistory
770<- IAM (Pseudomonas dacunhae) <- K. Arima, ATU; R-10-Z
67770IAM 1152 <-- K. Arima et al. R-10-2.

doi: 10.13145/bacdive2910.20240510.9

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Betaproteobacteria
  • order: Burkholderiales
  • family: Comamonadaceae
  • genus: Comamonas
  • species: Comamonas testosteroni
  • full scientific name: Comamonas testosteroni (Marcus and Talalay 1956) Tamaoka et al. 1987

  • synonyms

    • @ref: 20215
    • synonym: Pseudomonas testosteroni

@ref: 770

domain: Bacteria

phylum: Proteobacteria

class: Betaproteobacteria

order: Burkholderiales

family: Comamonadaceae

genus: Comamonas

species: Comamonas testosteroni

full scientific name: Comamonas testosteroni (Marcus and Talalay 1956) Tamaoka et al. 1987 emend. Willems et al. 1991

strain designation: R-10-Z

type strain: no

Culture and growth conditions

culture medium

  • @ref: 770
  • name: NUTRIENT AGAR (DSMZ Medium 1)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/1
  • composition: Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water

culture temp

@refgrowthtypetemperature
770positivegrowth30
67770positivegrowth30

Physiology and metabolism

compound production

@refcompound
770L alanine
770L aspartate ß-decarboxylase
770L glutamic acid

Isolation, sampling and environmental information

taxonmaps

  • @ref: 69479
  • File name: preview.99_294.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_1;96_202;97_220;98_249;99_294&stattab=map
  • Last taxonomy: Comamonas
  • 16S sequence: LC571937
  • Sequence Identity:
  • Total samples: 45208
  • soil counts: 5571
  • aquatic counts: 17183
  • animal counts: 18603
  • plant counts: 3851

Safety information

risk assessment

  • @ref: 770
  • pathogenicity human: yes, in single cases
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 67770
  • description: Comamonas testosteroni JCM 20077 gene for 16S rRNA, partial sequence
  • accession: LC571937
  • length: 1455
  • database: nuccore
  • NCBI tax ID: 285

External links

@ref: 770

culture collection no.: DSM 1455, IAM 1152, JCM 20077, ATCC 21192, CGMCC 1.8866

straininfo link

  • @ref: 72433
  • straininfo: 46365

literature

  • topic: Metabolism
  • Pubmed-ID: 16517628
  • title: Characterization of the terephthalate degradation genes of Comamonas sp. strain E6.
  • authors: Sasoh M, Masai E, Ishibashi S, Hara H, Kamimura N, Miyauchi K, Fukuda M
  • journal: Appl Environ Microbiol
  • DOI: 10.1128/AEM.72.3.1825-1832.2006
  • year: 2006
  • mesh: Bacterial Proteins/chemistry/*genetics/metabolism, Biodegradation, Environmental, Comamonas/classification/*enzymology/genetics/growth & development, Comamonas testosteroni, Dioxygenases/chemistry/*genetics/metabolism, Hydroxybenzoates/metabolism, Molecular Sequence Data, Multigene Family, Mutation, Oxidation-Reduction, Phthalic Acids/*metabolism, Sequence Analysis, DNA
  • topic2: Genetics

Reference

@idauthorscataloguedoi/urltitle
770Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 1455)https://www.dsmz.de/collection/catalogue/details/culture/DSM-1455
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.https://microbeatlas.org/MicrobeAtlas 1.0 beta
72433Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID46365.1StrainInfo: A central database for resolving microbial strain identifiers