Strain identifier

BacDive ID: 287

Type strain: No

Species: Aeromonas rivuli

Strain Designation: WB4.4-101

Strain history: <- E. M. Brambilla, DSMZ; WB4.4-101

NCBI tax ID(s): 648794 (species)

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General

@ref: 16385

BacDive-ID: 287

DSM-Number: 22538

keywords: 16S sequence, Bacteria, mesophilic

description: Aeromonas rivuli WB4.4-101 is a mesophilic bacterium that was isolated from hardwater rivulet water.

NCBI tax id

  • NCBI tax id: 648794
  • Matching level: species

strain history

  • @ref: 16385
  • history: <- E. M. Brambilla, DSMZ; WB4.4-101

doi: 10.13145/bacdive287.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Aeromonadales
  • family: Aeromonadaceae
  • genus: Aeromonas
  • species: Aeromonas rivuli
  • full scientific name: Aeromonas rivuli Figueras et al. 2011

@ref: 16385

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Aeromonadales

family: Aeromonadaceae

genus: Aeromonas

species: Aeromonas rivuli

full scientific name: Aeromonas rivuli Figueras et al. 2011

strain designation: WB4.4-101

type strain: no

Culture and growth conditions

culture medium

  • @ref: 16385
  • name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/535
  • composition: Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water

culture temp

  • @ref: 16385
  • growth: positive
  • type: growth
  • temperature: 28
  • range: mesophilic

Isolation, sampling and environmental information

isolation

  • @ref: 16385
  • sample type: hardwater rivulet water
  • geographic location: Harz, Westerhöfer Bach
  • country: Germany
  • origin.country: DEU
  • continent: Europe

isolation source categories

  • Cat1: #Environmental
  • Cat2: #Aquatic

taxonmaps

  • @ref: 69479
  • File name: preview.99_3322.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_11;96_15;97_15;98_18;99_3322&stattab=map
  • Last taxonomy: Aeromonas
  • 16S sequence: FJ976899
  • Sequence Identity:
  • Total samples: 39
  • aquatic counts: 24
  • animal counts: 12
  • plant counts: 3

Safety information

risk assessment

  • @ref: 16385
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 16385
  • description: Aeromonas rivuli strain WB4.4-101 16S ribosomal RNA gene, partial sequence
  • accession: FJ976899
  • length: 1503
  • database: ena
  • NCBI tax ID: 648794

External links

@ref: 16385

culture collection no.: DSM 22538

straininfo link

  • @ref: 69969
  • straininfo: 396931

literature

  • topic: Phylogeny
  • Pubmed-ID: 20207806
  • title: Aeromonas rivuli sp. nov., isolated from the upstream region of a karst water rivulet.
  • authors: Figueras MJ, Alperi A, Beaz-Hidalgo R, Stackebrandt E, Brambilla E, Monera A, Martinez-Murcia AJ
  • journal: Int J Syst Evol Microbiol
  • DOI: 10.1099/ijs.0.016139-0
  • year: 2010
  • mesh: Aeromonas/*classification/isolation & purification, *Bacterial Typing Techniques, DNA, Bacterial/genetics, Fresh Water/*microbiology, Genes, Bacterial, Molecular Sequence Data, Multilocus Sequence Typing, Phenotype, Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA
  • topic2: Genetics

Reference

@idauthorscataloguedoi/urltitle
16385Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 22538)https://www.dsmz.de/collection/catalogue/details/culture/DSM-22538
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.https://microbeatlas.org/MicrobeAtlas 1.0 beta
69969Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID396931.1StrainInfo: A central database for resolving microbial strain identifiers