Strain identifier
BacDive ID: 2671
Type strain: 
Species: Clostridium sp.
Strain history: <- A.W. Johnson <- K.N. Joblin <- B.M. Babior <- H.R. Hayward
NCBI tax ID(s): 1506 (species)
version 8.1 (current version)
General
@ref: 933
BacDive-ID: 2671
DSM-Number: 1975
keywords: 16S sequence, Bacteria, anaerobe, mesophilic
description: Clostridium sp. DSM 1975 is an anaerobe, mesophilic bacterium of the family Clostridiaceae.
NCBI tax id
- NCBI tax id: 1506
- Matching level: species
strain history
- @ref: 933
- history: <- A.W. Johnson <- K.N. Joblin <- B.M. Babior <- H.R. Hayward
doi: 10.13145/bacdive2671.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Clostridia
- order: Eubacteriales
- family: Clostridiaceae
- genus: Clostridium
- species: Clostridium sp.
- full scientific name: Clostridium Prazmowski 1880 (Approved Lists 1980)
synonyms
@ref synonym 20215 Tyzzerella 20215 Pseudoclostridium 20215 Lachnoclostridium 20215 Anaerobacter 20215 Inflabilis
@ref: 933
domain: Bacteria
phylum: Firmicutes
class: Clostridia
order: Clostridiales
family: Clostridiaceae
genus: Clostridium
species: Clostridium sp.
full scientific name: Clostridium sp.
type strain: no
Culture and growth conditions
culture medium
- @ref: 933
- name: CHOPPED MEAT MEDIUM WITH CARBOHYDRATES (DSMZ Medium 110)
- growth: yes
- link: https://mediadive.dsmz.de/medium/110
- composition: Name: CHOPPED MEAT MEDIUM WITH CARBOHYDRATES (DSMZ Medium 110) Composition: Ground beef 500.0 g/l Casitone 30.0 g/l Agar 15.0 g/l K2HPO4 5.0 g/l Yeast extract 5.0 g/l D-Glucose 4.0 g/l Starch 1.0 g/l Maltose 1.0 g/l Cellobiose 1.0 g/l L-Cysteine HCl 0.5 g/l Ethanol 0.19 g/l Vitamin K3 0.05 g/l Hemin 0.005 g/l Sodium resazurin 0.0005 g/l Vitamin K1 NaOH Distilled water
culture temp
- @ref: 933
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Physiology and metabolism
oxygen tolerance
- @ref: 933
- oxygen tolerance: anaerobe
compound production
- @ref: 933
- compound: ethanolamine ammonia-lyase
Isolation, sampling and environmental information
taxonmaps
- @ref: 69479
- File name: preview.99_4630.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_34;96_2305;97_2799;98_3476;99_4630&stattab=map
- Last taxonomy: Clostridium
- 16S sequence: X78074
- Sequence Identity:
- Total samples: 2886
- soil counts: 677
- aquatic counts: 339
- animal counts: 1770
- plant counts: 100
Sequence information
16S sequences
- @ref: 933
- description: Clostridium.sp (DSM 1975) 16S rRNA
- accession: X78074
- length: 1500
- database: ena
- NCBI tax ID: 1506
External links
@ref: 933
culture collection no.: DSM 1975
straininfo link
- @ref: 72200
- straininfo: 47519
Reference
| @id | authors | catalogue | doi/url | title |
|---|---|---|---|---|
| 933 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 1975) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-1975 | |
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta | |
| 72200 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID47519.1 | StrainInfo: A central database for resolving microbial strain identifiers |