Strain identifier
BacDive ID: 2546
Type strain: 
Species: Clostridium baratii
Strain Designation: 1116D, Prévot, 1116D, Prévot
Strain history: ATCC 25782 <-- L. DS. Smith VPI 4475.
NCBI tax ID(s): 1561 (species)
General
@ref: 766
BacDive-ID: 2546
DSM-Number: 1401
keywords: 16S sequence, Bacteria, anaerobe, mesophilic
description: Clostridium baratii 1116D is an anaerobe, mesophilic bacterium that was isolated from hog liver.
NCBI tax id
- NCBI tax id: 1561
- Matching level: species
strain history
| @ref | history |
|---|---|
| 766 | <- ATCC <- L.DS. Smith, VPI 4475 (C. perenne) <- A.R. Prévot, 1116 D |
| 67770 | ATCC 25782 <-- L. DS. Smith VPI 4475. |
doi: 10.13145/bacdive2546.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Clostridia
- order: Eubacteriales
- family: Clostridiaceae
- genus: Clostridium
- species: Clostridium baratii
- full scientific name: Clostridium baratii corrig. (Prévot 1938) Holdeman and Moore 1970 (Approved Lists 1980)
synonyms
@ref synonym 20215 Inflabilis barati 20215 Clostridium paraperfringens 20215 Clostridium perenne 20215 Clostridium barati 20215 Acuformis perennis
@ref: 766
domain: Bacteria
phylum: Firmicutes
class: Clostridia
order: Clostridiales
family: Clostridiaceae
genus: Clostridium
species: Clostridium baratii
full scientific name: Clostridium baratii (Prévot 1938) Holdeman and Moore 1970
strain designation: 1116D, Prévot, 1116D, Prévot
type strain: no
Culture and growth conditions
culture medium
- @ref: 766
- name: CHOPPED MEAT MEDIUM WITH CARBOHYDRATES (DSMZ Medium 110)
- growth: yes
- link: https://mediadive.dsmz.de/medium/110
- composition: Name: CHOPPED MEAT MEDIUM WITH CARBOHYDRATES (DSMZ Medium 110) Composition: Ground beef 500.0 g/l Casitone 30.0 g/l Agar 15.0 g/l K2HPO4 5.0 g/l Yeast extract 5.0 g/l D-Glucose 4.0 g/l Starch 1.0 g/l Maltose 1.0 g/l Cellobiose 1.0 g/l L-Cysteine HCl 0.5 g/l Ethanol 0.19 g/l Vitamin K3 0.05 g/l Hemin 0.005 g/l Sodium resazurin 0.0005 g/l Vitamin K1 NaOH Distilled water
culture temp
| @ref | growth | type | temperature | range |
|---|---|---|---|---|
| 766 | positive | growth | 37 | mesophilic |
| 67770 | positive | growth | 37 | mesophilic |
Physiology and metabolism
oxygen tolerance
- @ref: 766
- oxygen tolerance: anaerobe
Isolation, sampling and environmental information
isolation
| @ref | sample type |
|---|---|
| 766 | hog liver |
| 67770 | Hog liver |
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Host | #Mammals | #Suidae (Pig,Swine) |
| #Host Body-Site | #Organ | #Liver |
taxonmaps
- @ref: 69479
- File name: preview.99_3386.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_34;96_1766;97_2114;98_2594;99_3386&stattab=map
- Last taxonomy: Clostridium baratii
- 16S sequence: AB567726
- Sequence Identity:
- Total samples: 11853
- soil counts: 585
- aquatic counts: 927
- animal counts: 10123
- plant counts: 218
Safety information
risk assessment
- @ref: 766
- biosafety level: 2
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 67770
- description: Clostridium baratii gene for 16S ribosomal RNA, partial sequence, strain: JCM 1409
- accession: AB567726
- length: 1476
- database: ena
- NCBI tax ID: 1561
GC content
- @ref: 766
- GC-content: 25.0
External links
@ref: 766
culture collection no.: DSM 1401, ATCC 25782, NCIB 10675, VPI 4475, JCM 1409, NCIMB 10675
straininfo link
- @ref: 72080
- straininfo: 45771
Reference
| @id | authors | catalogue | doi/url | title |
|---|---|---|---|---|
| 766 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 1401) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-1401 | |
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta | |
| 72080 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID45771.1 | StrainInfo: A central database for resolving microbial strain identifiers |