Strain identifier
BacDive ID: 24863
Type strain: 
Species: Streptomyces cuspidosporus
Strain Designation: B-79
Strain history: KCC S-0316 <-- IFO 12378 <-- E. Higashide B-79.
NCBI tax ID(s): 66882 (species)
General
@ref: 18928
BacDive-ID: 24863
DSM-Number: 41653
keywords: 16S sequence, Bacteria, mesophilic, antibiotic compound production
description: Streptomyces cuspidosporus B-79 is a mesophilic bacterium that produces antibiotic compounds and was isolated from soil.
NCBI tax id
- NCBI tax id: 66882
- Matching level: species
strain history
| @ref | history |
|---|---|
| 18928 | <- IFO <- RTCI (E. Higashide, B-79) |
| 67770 | KCC S-0316 <-- IFO 12378 <-- E. Higashide B-79. |
doi: 10.13145/bacdive24863.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Kitasatosporales
- family: Streptomycetaceae
- genus: Streptomyces
- species: Streptomyces cuspidosporus
- full scientific name: Streptomyces cuspidosporus Higashide et al. 1966 (Approved Lists 1980)
@ref: 18928
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Streptomycetaceae
genus: Streptomyces
species: Streptomyces cuspidosporus
full scientific name: Streptomyces cuspidosporus Higashide et al. 1966
strain designation: B-79
type strain: yes
Culture and growth conditions
culture medium
| @ref | name | growth | link | composition |
|---|---|---|---|---|
| 18928 | GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) | yes | https://mediadive.dsmz.de/medium/65 | Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water |
| 18928 | STARCH - MINERAL SALT - AGAR (STMS) (DSMZ Medium 252) | yes | https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium252.pdf | |
| 18928 | ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) | yes | https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium84.pdf |
culture temp
| @ref | growth | type | temperature | range |
|---|---|---|---|---|
| 18928 | positive | growth | 28 | mesophilic |
| 67770 | positive | growth | 28 | mesophilic |
Physiology and metabolism
compound production
| @ref | compound |
|---|---|
| 18928 | tubercidin |
| 18928 | sparsomycine |
| 18928 | restriction endonuclease ScnI |
metabolite production
- @ref: 67770
- Chebi-ID: 48267
- metabolite: tubercidin
- production: yes
Isolation, sampling and environmental information
isolation
| @ref | sample type | geographic location | country | origin.country | continent |
|---|---|---|---|---|---|
| 18928 | soil | Kyoto | Japan | JPN | Asia |
| 67770 | Soil | Kyoto | Japan | JPN | Asia |
isolation source categories
- Cat1: #Environmental
- Cat2: #Terrestrial
- Cat3: #Soil
Safety information
risk assessment
- @ref: 18928
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
| @ref | description | accession | length | database | NCBI tax ID |
|---|---|---|---|---|---|
| 67770 | Streptomyces cuspidosporus gene for 16S rRNA, partial sequence, strain: NBRC 12378 | AB184090 | 1440 | ena | 66882 |
| 67770 | Streptomyces cuspidosporus strain IFO 12378 16S ribosomal RNA gene, partial sequence | AY589505 | 1405 | ena | 66882 |
| 67770 | Streptomyces cuspidosporus strain AS 4.1686 16S ribosomal RNA gene, partial sequence | AY999890 | 1405 | ena | 66882 |
External links
@ref: 18928
culture collection no.: DSM 41653, ATCC 33340, IFO 12378, JCM 4316, KCC S-0316, NRRL B-5620, DSM 41425, NBRC 12378, CBS 192.78, CGMCC 4.1686, KCTC 9718, VKM Ac-599
straininfo link
- @ref: 88676
- straininfo: 389488
Reference
| @id | authors | catalogue | doi/url | title |
|---|---|---|---|---|
| 18928 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 41653) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-41653 | |
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||
| 88676 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID389488.1 | StrainInfo: A central database for resolving microbial strain identifiers |