Strain identifier
BacDive ID: 24854
Type strain: 
Species: Streptosporangium carneum
Strain Designation: A 84575
Strain history: IFO 15562 <-- R. C. Yao A84575.
NCBI tax ID(s): 47481 (species)
version 8.1 (current version)
General
@ref: 11484
BacDive-ID: 24854
DSM-Number: 44125
keywords: 16S sequence, Bacteria, mesophilic
description: Streptosporangium carneum A 84575 is a mesophilic bacterium that was isolated from soil.
NCBI tax id
- NCBI tax id: 47481
- Matching level: species
strain history
| @ref | history |
|---|---|
| 11484 | <- D. P. Labeda, NRRL |
| 67770 | IFO 15562 <-- R. C. Yao A84575. |
doi: 10.13145/bacdive24854.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Streptosporangiales
- family: Streptosporangiaceae
- genus: Streptosporangium
- species: Streptosporangium carneum
- full scientific name: Streptosporangium carneum Mertz and Yao 1990
@ref: 11484
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Streptosporangiaceae
genus: Streptosporangium
species: Streptosporangium carneum
full scientific name: Streptosporangium carneum Mertz and Yao 1990
strain designation: A 84575
type strain: yes
Morphology
multimedia
- @ref: 11484
- multimedia content: https://www.dsmz.de/microorganisms/photos/DSM_44125.jpg
- caption: Medium 65 28°C
- intellectual property rights: © Leibniz-Institut DSMZ
Culture and growth conditions
culture medium
| @ref | name | growth | link | composition |
|---|---|---|---|---|
| 11484 | GYM+S MEDIUM (DSMZ Medium 214) | yes | https://mediadive.dsmz.de/medium/214 | Name: GYM+S MEDIUM (DSMZ Medium 214) Composition: Starch 20.0 g/l Agar 12.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water |
| 11484 | GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) | yes | https://mediadive.dsmz.de/medium/65 | Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water |
| 11484 | ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) | yes | https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium84.pdf |
culture temp
| @ref | growth | type | temperature | range |
|---|---|---|---|---|
| 11484 | positive | growth | 28 | mesophilic |
| 67770 | positive | growth | 28 | mesophilic |
| 11484 | positive | growth | 2 | psychrophilic |
Physiology and metabolism
compound production
- @ref: 67770
- compound: Lipoglycopeptide antibiotic
observation
- @ref: 67770
- observation: quinones: MK-9(H4), MK-9(H2)
Isolation, sampling and environmental information
isolation
| @ref | sample type | geographic location | country | origin.country | continent |
|---|---|---|---|---|---|
| 11484 | soil | Nairobi, Tana River | Kenya | KEN | Africa |
| 67770 | Soil by the Tana River | Nairobi | Kenya | KEN | Africa |
isolation source categories
- Cat1: #Environmental
- Cat2: #Terrestrial
- Cat3: #Soil
Safety information
risk assessment
- @ref: 11484
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 20218
- description: S.carneum DNA for 16S ribosomal RNA gene
- accession: X89938
- length: 1450
- database: ena
- NCBI tax ID: 47481
External links
@ref: 11484
culture collection no.: DSM 44125, NRRL 18437, JCM 9926, CGMCC 4.2063, IFO 15111, IFO 15562, NBRC 15111, NBRC 15562, NCIMB 13202, VKM Ac-2007
straininfo link
- @ref: 88668
- straininfo: 60807
literature
- topic: Phylogeny
- Pubmed-ID: 24760800
- title: Streptosporangium jomthongense sp. nov., an actinomycete isolated from rhizospheric soil and emendation of the genus Streptosporangium.
- authors: Intra B, Matsumoto A, Inahashi Y, Omura S, Panbangred W, Takahashi Y
- journal: Int J Syst Evol Microbiol
- DOI: 10.1099/ijs.0.061978-0
- year: 2014
- mesh: Actinomycetales/*classification/genetics/isolation & purification, Araceae, Bacterial Typing Techniques, DNA, Bacterial/genetics, Fatty Acids/chemistry, Molecular Sequence Data, Nucleic Acid Hybridization, Phospholipids/chemistry, *Phylogeny, RNA, Ribosomal, 16S/genetics, *Rhizosphere, Sequence Analysis, DNA, *Soil Microbiology, Thailand, Vitamin K 2/analogs & derivatives/chemistry
- topic2: Genetics
Reference
| @id | authors | catalogue | doi/url | title | journal | pubmed |
|---|---|---|---|---|---|---|
| 11484 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 44125) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-44125 | |||
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
| 20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||||
| 88668 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID60807.1 | StrainInfo: A central database for resolving microbial strain identifiers |