Strain identifier
BacDive ID: 24853
Type strain: 
Species: Actinocorallia aurea
Strain Designation: 1717-H6
Strain history: <- IFO <- A. Shimazu, IAM; 1717-H6
NCBI tax ID(s): 65511 (species)
version 9 (current version)
General
@ref: 11746
BacDive-ID: 24853
DSM-Number: 44435
keywords: 16S sequence, Bacteria
description: Actinocorallia aurea 1717-H6 is a bacterium that was isolated from soil of grass-grown garden.
NCBI tax id
- NCBI tax id: 65511
- Matching level: species
strain history
- @ref: 11746
- history: <- IFO <- A. Shimazu, IAM; 1717-H6
doi: 10.13145/bacdive24853.20240510.9
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Streptosporangiales
- family: Thermomonosporaceae
- genus: Actinocorallia
- species: Actinocorallia aurea
- full scientific name: Actinocorallia aurea Tamura et al. 2007
@ref: 11746
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Streptosporangiales
family: Thermomonosporaceae
genus: Actinocorallia
species: Actinocorallia aurea
full scientific name: Actinocorallia aurea Tamura et al. 2007
strain designation: 1717-H6
type strain: no
Culture and growth conditions
culture medium
| @ref | name | growth | link | composition |
|---|---|---|---|---|
| 11746 | GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) | yes | https://mediadive.dsmz.de/medium/65 | Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water |
| 11746 | STARCH - MINERAL SALT - AGAR (STMS) (DSMZ Medium 252) | yes | https://mediadive.dsmz.de/medium/252 | Name: STARCH - MINERAL SALT - AGAR (STMS) (DSMZ Medium 252) Composition: Agar 14.985 g/l Starch 9.99001 g/l (NH4)2SO4 1.998 g/l CaCO3 1.998 g/l K2HPO4 0.999001 g/l MgSO4 x 7 H2O 0.999001 g/l NaCl 0.999001 g/l FeSO4 x 7 H2O 0.000999001 g/l MnCl2 x 4 H2O 0.000999001 g/l ZnSO4 x 7 H2O 0.000999001 g/l Distilled water |
culture temp
- @ref: 11746
- growth: positive
- type: growth
- temperature: 28
Isolation, sampling and environmental information
isolation
- @ref: 11746
- sample type: soil of grass-grown garden
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Engineered | #Agriculture | #Garden |
| #Environmental | #Terrestrial | #Soil |
| #Host | #Plants | #Herbaceous plants (Grass,Crops) |
Sequence information
16S sequences
- @ref: 124043
- description: Actinocorallia aurea gene for 16S ribosomal RNA, partial sequence, strain: NBRC 15120 (= IFO 15120).
- accession: AB006160
- length: 1464
- database: nuccore
- NCBI tax ID: 65511
External links
@ref: 11746
culture collection no.: DSM 44435, IFO 15120, NBRC 15120
straininfo link
- @ref: 88667
- straininfo: 62781
literature
- topic: Phylogeny
- Pubmed-ID: 17766870
- title: Classification of 'Sarraceniospora aurea' Furihata et al. 1989 as Actinocorallia aurea sp. nov.
- authors: Tamura T, Hatano K, Suzuki KI
- journal: Int J Syst Evol Microbiol
- DOI: 10.1099/ijs.0.64008-0
- year: 2007
- mesh: Actinobacteria/chemistry/*classification/*genetics, Alanine/analysis, Bacterial Typing Techniques, Cell Wall/chemistry, DNA, Bacterial/chemistry/genetics, DNA, Ribosomal/chemistry/genetics, Diaminopimelic Acid/analysis, Genes, rRNA, Glutamic Acid/analysis, Molecular Sequence Data, Nucleic Acid Hybridization, Phylogeny, RNA, Bacterial/genetics, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Sequence Homology, Nucleic Acid, Vitamin K 2/analysis
- topic2: Genetics
Reference
| @id | authors | catalogue | doi/url | title |
|---|---|---|---|---|
| 11746 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 44435) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-44435 | |
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
| 88667 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID62781.1 | StrainInfo: A central database for resolving microbial strain identifiers | |
| 124043 | Dr. Isabel Schober, Dr. Julia Koblitz | Data extracted from sequence databases, automatically matched based on designation and taxonomy |