Strain identifier
BacDive ID: 24741
Type strain: 
Species: Sediminibacterium magnilacihabitans
Strain Designation: MU-1
Strain history: <- R. A. Albert, Marquette Univ., WI, USA; MU-1
NCBI tax ID(s): 669455 (species)
General
@ref: 21305
BacDive-ID: 24741
DSM-Number: 21712
keywords: 16S sequence, Bacteria, mesophilic
description: Sediminibacterium magnilacihabitans MU-1 is a mesophilic bacterium that was isolated from lake water from a community water system.
NCBI tax id
- NCBI tax id: 669455
- Matching level: species
strain history
- @ref: 21305
- history: <- R. A. Albert, Marquette Univ., WI, USA; MU-1
doi: 10.13145/bacdive24741.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacteroidota
- domain: Bacteria
- phylum: Bacteroidota
- class: Chitinophagia
- order: Chitinophagales
- family: Chitinophagaceae
- genus: Sediminibacterium
- species: Sediminibacterium magnilacihabitans
- full scientific name: Sediminibacterium magnilacihabitans (Albert et al. 2014) García-López et al. 2020
synonyms
- @ref: 20215
- synonym: Vibrionimonas magnilacihabitans
@ref: 21305
domain: Bacteria
phylum: Bacteroidetes
class: Chitinophagia
order: Sphingobacteriales
family: Chitinophagaceae
genus: Sediminibacterium
species: Sediminibacterium magnilacihabitans
full scientific name: Sediminibacterium magnilacihabitans (Albert et al. 2014) García-López et al. 2020
strain designation: MU-1
type strain: no
Culture and growth conditions
culture medium
- @ref: 21305
- name: R2A MEDIUM (DSMZ Medium 830)
- growth: yes
- link: https://mediadive.dsmz.de/medium/830
- composition: Name: R2A MEDIUM (DSMZ Medium 830) Composition: Agar 15.0 g/l Casamino acids 0.5 g/l Starch 0.5 g/l Glucose 0.5 g/l Proteose peptone 0.5 g/l Yeast extract 0.5 g/l K2HPO4 0.3 g/l Na-pyruvate 0.3 g/l MgSO4 x 7 H2O 0.05 g/l Distilled water
culture temp
- @ref: 21305
- growth: positive
- type: growth
- temperature: 28
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 21305
- sample type: lake water from a community water system
- geographic location: Wisconsin, Lake Michigan, Port Washington
- country: USA
- origin.country: USA
- continent: North America
isolation source categories
- Cat1: #Environmental
- Cat2: #Aquatic
- Cat3: #Lake (large)
taxonmaps
- @ref: 69479
- File name: preview.99_44433.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_185;96_1179;97_1383;98_32245;99_44433&stattab=map
- Last taxonomy: Sediminibacterium magnilacihabitans
- 16S sequence: EU559746
- Sequence Identity:
- Total samples: 14083
- soil counts: 2579
- aquatic counts: 2659
- animal counts: 7557
- plant counts: 1288
Safety information
risk assessment
- @ref: 21305
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 21305
- description: Bacteroidetes bacterium MU1 16S ribosomal RNA gene, partial sequence
- accession: EU559746
- length: 1420
- database: ena
- NCBI tax ID: 515323
External links
@ref: 21305
culture collection no.: DSM 21712, NRRL B-51334
straininfo link
- @ref: 88569
- straininfo: 401781
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 21305 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-21712 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 21712) | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ | |
| 88569 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID401781.1 |