Strain identifier

BacDive ID: 24721

Type strain: Yes

Species: Belliella pelovolcani

Strain Designation: CC-SAL-25

Strain history: <- C-C Young, National Chung-Hsing Univ., Taiwan

NCBI tax ID(s): 529505 (species)

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General

@ref: 20457

BacDive-ID: 24721

DSM-Number: 46698

keywords: genome sequence, 16S sequence, Bacteria, aerobe, mesophilic, Gram-negative, rod-shaped

description: Belliella pelovolcani CC-SAL-25 is an aerobe, mesophilic, Gram-negative bacterium that was isolated from rare mud-volcano.

NCBI tax id

  • NCBI tax id: 529505
  • Matching level: species

strain history

@refhistory
20457<- KCTC; KCTC 13248
67771<- C-C Young, National Chung-Hsing Univ., Taiwan

doi: 10.13145/bacdive24721.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacteroidota
  • domain: Bacteria
  • phylum: Bacteroidota
  • class: Cytophagia
  • order: Cytophagales
  • family: Cyclobacteriaceae
  • genus: Belliella
  • species: Belliella pelovolcani
  • full scientific name: Belliella pelovolcani Arun et al. 2009

@ref: 20457

domain: Bacteria

phylum: Bacteroidetes

class: Cytophagia

order: Cytophagales

family: Cyclobacteriaceae

genus: Belliella

species: Belliella pelovolcani

full scientific name: Belliella pelovolcani Arun et al. 2009

strain designation: CC-SAL-25

type strain: yes

Morphology

cell morphology

@refgram staincell lengthcell widthcell shapemotilityconfidence
29260negative3.5 µm0.3 µmrod-shapedno
67771rod-shapedno
67771positive
69480no90.915
69480negative99.994

pigmentation

  • @ref: 29260
  • production: yes

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
20457BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)yeshttps://mediadive.dsmz.de/medium/514Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water
20457HALF STRENGTH BACTO MARINE BROTH (DSMZ Medium 514a)yeshttps://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium514a.pdf

culture temp

@refgrowthtypetemperaturerange
20457positivegrowth28mesophilic
29260positivegrowth25-40
29260positiveoptimum37mesophilic
67771positivegrowth37mesophilic

culture pH

@refabilitytypepHPH range
29260positivegrowth6.0-9.0alkaliphile
29260positiveoptimum8

Physiology and metabolism

oxygen tolerance

@refoxygen tolerance
29260aerobe
67771aerobe

spore formation

@refspore formationconfidence
29260no
67771no
69481no100
69480no99.969

halophily

@refsaltgrowthtested relationconcentration
29260NaClpositivegrowth0.5-6 %
29260NaClpositiveoptimum3 %

observation

  • @ref: 67771
  • observation: quinones: MK-7

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
2926030089acetate+carbon source
2926021217L-alaninamide+carbon source
2926016449alanine+carbon source
2926022599arabinose+carbon source
2926018403L-arabitol+carbon source
2926017057cellobiose+carbon source
2926023652dextrin+carbon source
2926028757fructose+carbon source
2926033984fucose+carbon source
2926028260galactose+carbon source
2926017234glucose+carbon source
2926029987glutamate+carbon source
2926028087glycogen+carbon source
2926017596inosine+carbon source
2926017716lactose+carbon source
2926017306maltose+carbon source
2926037684mannose+carbon source
2926028053melibiose+carbon source
2926037657methyl D-glucoside+carbon source
29260506227N-acetylglucosamine+carbon source
2926018257ornithine+carbon source
2926016634raffinose+carbon source
2926017814salicin+carbon source
2926030031succinate+carbon source
2926017992sucrose+carbon source
2926026986threonine+carbon source
2926017748thymidine+carbon source
2926027082trehalose+carbon source
2926053423tween 40+carbon source
2926053426tween 80+carbon source
2926016704uridine+carbon source
2926017151xylitol+carbon source
292604853esculin+hydrolysis

metabolite production

  • @ref: 29260
  • Chebi-ID: 16136
  • metabolite: hydrogen sulfide
  • production: yes

enzymes

@refvalueactivityec
29260acid phosphatase+3.1.3.2
29260alkaline phosphatase+3.1.3.1
29260catalase+1.11.1.6
29260cytochrome oxidase+1.9.3.1

Isolation, sampling and environmental information

isolation

@refsample typegeographic locationcountryorigin.countrycontinent
20457rare mud-volcanoPingtung County,WandanTaiwanTWNAsia
67771From Mud volcanoTaiwanTWNAsia

isolation source categories

Cat1Cat2Cat3
#Environmental#Terrestrial#Mud (Sludge)
#Environmental#Terrestrial#Volcanic

taxonmaps

  • @ref: 69479
  • File name: preview.99_4963.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_15774;96_2433;97_2964;98_3711;99_4963&stattab=map
  • Last taxonomy: Belliella
  • 16S sequence: EU685336
  • Sequence Identity:
  • Total samples: 266
  • soil counts: 46
  • aquatic counts: 104
  • animal counts: 84
  • plant counts: 32

Safety information

risk assessment

  • @ref: 20457
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 20457
  • description: Belliella pelovolcani strain CC-SAL-25 16S ribosomal RNA gene, partial sequence
  • accession: EU685336
  • length: 1444
  • database: ena
  • NCBI tax ID: 529505

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Belliella pelovolcani DSM 46698GCA_900156785scaffoldncbi529505
66792Belliella pelovolcani strain DSM 46698529505.3wgspatric529505
66792Belliella pelovolcani DSM 466982681813558draftimg529505

GC content

@refGC-content
2926039-41
6777140.0

Genome-based predictions

predictions

traitpredictionconfidencetraining_data
spore-formingno100no
motileno90.164yes
flagellatedno96.95no
gram-positiveno97.968no
anaerobicno97.497yes
aerobicyes90.096yes
halophileno68.729no
spore-formingno94.744yes
thermophileno96.108yes
glucose-utilyes87.985no
glucose-fermentno89.074no

External links

@ref: 20457

culture collection no.: DSM 46698, BCRC 17883, KCTC 13248

straininfo link

  • @ref: 88551
  • straininfo: 403155

literature

topicPubmed-IDtitleauthorsjournalDOIyearmeshtopic2
Phylogeny19622643Belliella pelovolcani sp. nov., isolated from a mud-volcano in Taiwan.Arun AB, Young CC, Chen WM, Hung MH, Lai WA, Chou JH, Rekha PD, Shen FT, Su SPInt J Syst Evol Microbiol10.1099/ijs.0.009753-02009Cytophagaceae/chemistry/classification/genetics/*isolation & purification, DNA, Bacterial/genetics, DNA, Ribosomal/genetics, Fatty Acids/chemistry, Geologic Sediments/*microbiology, Molecular Sequence Data, Phylogeny, RNA, Ribosomal, 16S/genetics, TaiwanGenetics
Phylogeny25385994Belliella kenyensis sp. nov., isolated from an alkaline lake.Akhwale JK, Goker M, Rohde M, Schumann P, Klenk HP, Boga HIInt J Syst Evol Microbiol10.1099/ijs.0.066951-02014Bacterial Typing Techniques, Bacteroidetes/*classification/genetics/isolation & purification, Base Composition, DNA, Bacterial/genetics, Fatty Acids/chemistry, Geologic Sediments/microbiology, Kenya, Lakes/*microbiology, Molecular Sequence Data, Phosphatidylethanolamines/chemistry, Phospholipids/chemistry, *Phylogeny, Pigmentation, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Vitamin K 2/analogs & derivatives/chemistryGenetics
Phylogeny25716953Belliella aquatica sp. nov., isolated from a saline lake.Zhong ZP, Liu Y, Hou TT, Zhou YG, Liu HC, Liu ZPInt J Syst Evol Microbiol10.1099/ijs.0.0001482015Bacterial Typing Techniques, Bacteroidetes/*classification/genetics/isolation & purification, Base Composition, China, DNA, Bacterial/genetics, Fatty Acids/chemistry, Lakes/*microbiology, Molecular Sequence Data, Phospholipids/chemistry, *Phylogeny, RNA, Ribosomal, 16S/genetics, Salinity, Sequence Analysis, DNA, Vitamin K 2/analogs & derivatives/chemistryGenetics
Phylogeny26474559Belliella buryatensis sp. nov., isolated from alkaline lake water.Kozyreva L, Egorova D, Anan'ina L, Plotnikova E, Ariskina E, Prisyazhnaya N, Radnaeva L, Namsaraev BInt J Syst Evol Microbiol10.1099/ijsem.0.0006822015Alkalies, Bacterial Typing Techniques, Bacteroidetes/*classification/genetics/isolation & purification, Base Composition, DNA, Bacterial/genetics, Fatty Acids/chemistry, Lakes/*microbiology, Molecular Sequence Data, Nucleic Acid Hybridization, *Phylogeny, Pigmentation, RNA, Ribosomal, 16S/genetics, Russia, Sequence Analysis, DNA, Vitamin K 2/analogs & derivatives/chemistryGenetics

Reference

@idauthorstitledoi/urlcatalogueID_cross_referencepubmed
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
20457Curators of the DSMZhttps://www.dsmz.de/collection/catalogue/details/culture/DSM-46698Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 46698)
29260Barberan A, Caceres Velazquez H, Jones S, Fierer N.Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information10.1128/mSphere.00237-172567828776041
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes
67771Curators of the KCTChttps://kctc.kribb.re.kr/En/Kctc
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/
69480Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannPredictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes
69481Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. MünchPredictions based on the model GenomeNet Sporulation v. 110.21203/rs.3.rs-2527258/v1
88551Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID403155.1