Strain identifier
BacDive ID: 24550
Type strain: 
Species: Sphingobacterium sp.
Strain Designation: PC1.9
Strain history: <- P. Hugenholtz, UQM; PC1.9
NCBI tax ID(s): 341027 (species)
version 9 (current version)
General
@ref: 20811
BacDive-ID: 24550
DSM-Number: 9249
keywords: 16S sequence, Bacteria
description: Sphingobacterium sp. PC1.9 is a bacterium that was isolated from Cooling coils in an air-handling system.
NCBI tax id
- NCBI tax id: 341027
- Matching level: species
strain history
- @ref: 20811
- history: <- P. Hugenholtz, UQM; PC1.9
doi: 10.13145/bacdive24550.20240510.9
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacteroidota
- domain: Bacteria
- phylum: Bacteroidota
- class: Sphingobacteriia
- order: Sphingobacteriales
- family: Sphingobacteriaceae
- genus: Sphingobacterium
- species: Sphingobacterium sp.
- full scientific name: Sphingobacterium Yabuuchi et al. 1983
synonyms
- @ref: 20215
- synonym: Sphingobacterium
@ref: 20811
domain: Bacteria
phylum: Bacteroidetes
class: Sphingobacteriia
order: Sphingobacteriales
family: Sphingobacteriaceae
genus: Sphingobacterium
species: Sphingobacterium sp.
full scientific name: Sphingobacterium sp.
strain designation: PC1.9
type strain: no
Culture and growth conditions
culture medium
- @ref: 20811
- name: R3 A MEDIUM (DSMZ Medium 1153)
- growth: yes
- link: https://mediadive.dsmz.de/medium/1153
- composition: Name: R3 A MEDIUM (DSMZ Medium 1153) Composition: Agar 15.0 g/l Casamino acids 1.0 g/l Starch 1.0 g/l Glucose 1.0 g/l Proteose peptone 1.0 g/l Yeast extract 1.0 g/l K2HPO4 0.6 g/l Sodium pyruvate 0.5 g/l MgSO4 x 7 H2O 0.1 g/l Distilled water
culture temp
- @ref: 20811
- growth: positive
- type: growth
- temperature: 28
Isolation, sampling and environmental information
isolation
- @ref: 20811
- sample type: Cooling coils in an air-handling system
- geographic location: Brisbane, Queensland
- country: Australia
- origin.country: AUS
- continent: Australia and Oceania
isolation source categories
- Cat1: #Engineered
- Cat2: #Built environment
- Cat3: #Air conditioner
taxonmaps
- @ref: 69479
- File name: preview.99_16304.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_115;96_2052;97_10007;98_12302;99_16304&stattab=map
- Last taxonomy: Mucilaginibacter carri subclade
- 16S sequence: X89912
- Sequence Identity:
- Total samples: 819
- soil counts: 177
- aquatic counts: 177
- animal counts: 242
- plant counts: 223
Sequence information
16S sequences
- @ref: 20811
- description: Sphingobacterium-like sp. PC1.9 partial 16S rRNA gene, strain PC1.9
- accession: X89912
- length: 1281
- database: nuccore
- NCBI tax ID: 113222
External links
@ref: 20811
culture collection no.: DSM 9249
straininfo link
- @ref: 88405
- straininfo: 87969
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 20811 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-9249 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 9249) | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ | |
| 88405 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID87969.1 |