Strain identifier
BacDive ID: 24309
Type strain: 
Species: Aminobacter sp.
Strain Designation: 735
Strain history: <- J. Rudat, KIT; strain 735 <- A. Puñal, Univ. Karlsruhe, Institut f. Bio- und Lebensmitteltechnik, Germany
NCBI tax ID(s): 1072666 (species)
version 8.1 (current version)
General
@ref: 20305
BacDive-ID: 24309
DSM-Number: 24755
keywords: 16S sequence, Bacteria, psychrophilic
description: Aminobacter sp. 735 is a psychrophilic bacterium that was isolated from sea bottom surface liquid clay-silt.
NCBI tax id
- NCBI tax id: 1072666
- Matching level: species
strain history
- @ref: 20305
- history: <- J. Rudat, KIT; strain 735 <- A. Puñal, Univ. Karlsruhe, Institut f. Bio- und Lebensmitteltechnik, Germany
doi: 10.13145/bacdive24309.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Alphaproteobacteria
- order: Hyphomicrobiales
- family: Phyllobacteriaceae
- genus: Aminobacter
- species: Aminobacter sp.
- full scientific name: Aminobacter Urakami et al. 1992
synonyms
@ref synonym 20215 Chelatobacter 20215 Carbophilus
@ref: 20305
domain: Bacteria
phylum: Proteobacteria
class: Alphaproteobacteria
order: Rhizobiales
family: Phyllobacteriaceae
genus: Aminobacter
species: Aminobacter sp.
full scientific name: Aminobacter sp.
strain designation: 735
type strain: no
Morphology
colony morphology
- @ref: 20305
- incubation period: 3-7 days
Culture and growth conditions
culture medium
| @ref | name | growth | link | composition |
|---|---|---|---|---|
| 20305 | LB (Luria-Bertani) MEDIUM (DSMZ Medium 381) | yes | https://mediadive.dsmz.de/medium/381 | Name: LB (Luria-Bertani) MEDIUM (DSMZ Medium 381) Composition: Agar 20.0 g/l NaCl 10.0 g/l Tryptone 10.0 g/l Yeast extract 5.0 g/l Distilled water |
| 20305 | R2A MEDIUM (DSMZ Medium 830) | yes | https://mediadive.dsmz.de/medium/830 | Name: R2A MEDIUM (DSMZ Medium 830) Composition: Agar 15.0 g/l Casamino acids 0.5 g/l Starch 0.5 g/l Glucose 0.5 g/l Proteose peptone 0.5 g/l Yeast extract 0.5 g/l K2HPO4 0.3 g/l Na-pyruvate 0.3 g/l MgSO4 x 7 H2O 0.05 g/l Distilled water |
culture temp
- @ref: 20305
- growth: positive
- type: growth
- temperature: 20
- range: psychrophilic
Isolation, sampling and environmental information
isolation
- @ref: 20305
- sample type: sea bottom surface liquid clay-silt
- geographic location: Raunefjorden
- country: Norway
- origin.country: NOR
- continent: Europe
- latitude: 60.2753
- longitude: 5.1842
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Environmental | #Aquatic | #Marine |
| #Environmental | #Terrestrial | #Mud (Sludge) |
taxonmaps
- @ref: 69479
- File name: preview.99_1038.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_5;96_220;97_697;98_812;99_1038&stattab=map
- Last taxonomy: Mesorhizobium
- 16S sequence: HE578127
- Sequence Identity:
- Total samples: 1264
- soil counts: 780
- aquatic counts: 308
- animal counts: 145
- plant counts: 31
Sequence information
16S sequences
- @ref: 20305
- description: Aminobacter sp. DSM 24755 partial 16S rRNA gene, strain 735
- accession: HE578127
- length: 1033
- database: ena
- NCBI tax ID: 1072666
External links
@ref: 20305
culture collection no.: DSM 24755
straininfo link
- @ref: 88242
- straininfo: 401983
literature
- Pubmed-ID: 22738219
- title: Novel amidases of two Aminobacter sp. strains: Biotransformation experiments and elucidation of gene sequences.
- authors: Engel U, Syldatk C, Rudat J
- journal: AMB Express
- DOI: 10.1186/2191-0855-2-33
- year: 2012
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 20305 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-24755 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 24755) | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ | |
| 88242 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID401983.1 |