Strain identifier
BacDive ID: 24044
Type strain:
Species: Chryseobacterium geocarposphaerae
Strain Designation: 91A-576
Strain history: <- P. Kämpfer, Justus-Liebig-Universität, Giessen, Germany; 91A-576 <- J. Mcinroy
NCBI tax ID(s): 1416776 (species)
General
@ref: 20939
BacDive-ID: 24044
DSM-Number: 27618
keywords: 16S sequence, Bacteria, mesophilic
description: Chryseobacterium geocarposphaerae 91A-576 is a mesophilic bacterium that was isolated from geocarposphere of very immature peanuts .
NCBI tax id
- NCBI tax id: 1416776
- Matching level: species
strain history
- @ref: 20939
- history: <- P. Kämpfer, Justus-Liebig-Universität, Giessen, Germany; 91A-576 <- J. Mcinroy
doi: 10.13145/bacdive24044.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacteroidota
- domain: Bacteria
- phylum: Bacteroidota
- class: Flavobacteriia
- order: Flavobacteriales
- family: Weeksellaceae
- genus: Chryseobacterium
- species: Chryseobacterium geocarposphaerae
- full scientific name: Chryseobacterium geocarposphaerae Kämpfer et al. 2014
@ref: 20939
domain: Bacteria
phylum: Bacteroidetes
class: Flavobacteriia
order: Flavobacteriales
family: Weeksellaceae
genus: Chryseobacterium
species: Chryseobacterium geocarposphaerae
full scientific name: Chryseobacterium geocarposphaerae Kämpfer et al. 2014
strain designation: 91A-576
type strain: no
Culture and growth conditions
culture medium
- @ref: 20939
- name: CASO AGAR (MERCK 105458) (DSMZ Medium 220)
- growth: yes
- link: https://mediadive.dsmz.de/medium/220
- composition: Name: CASO AGAR (Merck 105458) (DSMZ Medium 220) Composition: Agar 15.0 g/l Casein peptone 15.0 g/l NaCl 5.0 g/l Soy peptone 5.0 g/l Distilled water
culture temp
- @ref: 20939
- growth: positive
- type: growth
- temperature: 28
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 20939
- sample type: geocarposphere (soil around the pod) of very immature peanuts (Arachis hypogaea)
- host species: Arachis hypogaea
- geographic location: Alabama, Henry county, Headland, Wiregrass Research and Extension Center
- country: USA
- origin.country: USA
- continent: North America
isolation source categories
Cat1 | Cat2 | Cat3 |
---|---|---|
#Environmental | #Terrestrial | #Soil |
#Host | #Plants | #Herbaceous plants (Grass,Crops) |
Safety information
risk assessment
- @ref: 20939
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 20939
- description: Chryseobacterium geocarposphaerae partial 16S rRNA gene, strain 91A-576
- accession: HG738133
- length: 1443
- database: ena
- NCBI tax ID: 1416776
External links
@ref: 20939
culture collection no.: DSM 27618, CCM 8487, LMG 27812
straininfo link
- @ref: 88017
- straininfo: 390474
literature
- topic: Phylogeny
- Pubmed-ID: 24379020
- title: Chryseobacterium zeae sp. nov., Chryseobacterium arachidis sp. nov., and Chryseobacterium geocarposphaerae sp. nov. isolated from the rhizosphere environment.
- authors: Kampfer P, McInroy JA, Glaeser SP
- journal: Antonie Van Leeuwenhoek
- DOI: 10.1007/s10482-013-0101-4
- year: 2013
- mesh: Bacteriophage Typing, Chryseobacterium/*classification/genetics/isolation & purification/metabolism, Cluster Analysis, Fatty Acids/metabolism, Molecular Sequence Data, Phylogeny, RNA, Ribosomal, 16S/genetics, *Rhizosphere, *Soil Microbiology
- topic2: Metabolism
Reference
@id | authors | title | doi/url | catalogue |
---|---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
20939 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-27618 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 27618) | |
88017 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID390474.1 |