Strain identifier
BacDive ID: 24002
Type strain: 
Species: Enterococcus faecalis
Strain Designation: 12
Strain history: <- Marina Goderdzishvili, Eliava Institute of Bacteriophages, Microbiology and Virology, Tbilisi, Georgia
NCBI tax ID(s): 1351 (species)
version 9.1 (current version)
General
@ref: 20956
BacDive-ID: 24002
DSM-Number: 25643
keywords: genome sequence, Bacteria, Gram-positive
description: Enterococcus faecalis 12 is a Gram-positive bacterium that was isolated from Patient.
NCBI tax id
- NCBI tax id: 1351
- Matching level: species
strain history
- @ref: 20956
- history: <- Marina Goderdzishvili, Eliava Institute of Bacteriophages, Microbiology and Virology, Tbilisi, Georgia
doi: 10.13145/bacdive24002.20240916.9.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Bacilli
- order: Lactobacillales
- family: Enterococcaceae
- genus: Enterococcus
- species: Enterococcus faecalis
- full scientific name: Enterococcus faecalis (Andrewes and Horder 1906) Schleifer and Kilpper-Bälz 1984
synonyms
- @ref: 20215
- synonym: Streptococcus faecalis
@ref: 20956
domain: Bacteria
phylum: Firmicutes
class: Bacilli
order: Lactobacillales
family: Enterococcaceae
genus: Enterococcus
species: Enterococcus faecalis
full scientific name: Enterococcus faecalis (Andrewes and Horder 1906) Schleifer and Kilpper-Bälz 1984
strain designation: 12
type strain: no
Culture and growth conditions
culture medium
- @ref: 20956
- name: BHI MEDIUM (DSMZ Medium 215)
- growth: yes
- link: https://mediadive.dsmz.de/medium/215
- composition: Name: BHI MEDIUM (DSMZ Medium 215) Composition: Brain heart infusion 37.0 g/l Distilled water
culture temp
- @ref: 20956
- growth: positive
- type: growth
- temperature: 37
Isolation, sampling and environmental information
isolation
- @ref: 20956
- sample type: Patient
- country: Georgia
- origin.country: GEO
- continent: Asia
isolation source categories
| Cat1 | Cat2 |
|---|---|
| #Infection | #Patient |
| #Host | #Human |
Safety information
risk assessment
- @ref: 20956
- biosafety level: 2
- biosafety level comment: Risk group (German classification)
Sequence information
Genome sequences
| @ref | description | accession | assembly level | database | NCBI tax ID |
|---|---|---|---|---|---|
| 66792 | Enterococcus faecalis 12 | GCA_000788155 | scaffold | ncbi | 1351 |
| 66792 | Enterococcus faecalis 12 | 1351.116 | wgs | patric | 1351 |
| 66792 | Enterococcus faecalis 12 | 2636415556 | draft | img | 1351 |
Genome-based predictions
predictions
| @ref | trait | model | description | prediction | confidence | training_data |
|---|---|---|---|---|---|---|
| 69480 | gram-positive | gram-positive | Positive reaction to Gram-staining | yes | 87.851 | no |
| 69480 | anaerobic | anaerobic | Ability to grow under anoxygenic conditions (including facultative anaerobes) | no | 83.878 | no |
| 69480 | aerobic | aerobic | Ability to grow under oxygenic conditions (including facultative aerobes) | no | 92.584 | no |
| 69480 | spore-forming | spore-forming | Ability to form endo- or exospores | no | 75.609 | no |
| 69480 | thermophilic | thermophile | Ability to grow at temperatures above or equal to 45°C | no | 94.5 | yes |
| 69480 | flagellated | motile2+ | Ability to perform flagellated movement | no | 87 | no |
External links
@ref: 20956
culture collection no.: DSM 25643
straininfo link
- @ref: 87977
- straininfo: 403792
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 20956 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-25643 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 25643) | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 87977 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID403792.1 |