General

@ref: 20527

BacDive-ID: 23893

DSM-Number: 25524

keywords: 16S sequence, Bacteria, anaerobe, mesophilic

description: Desulfatiferula berrensis BE2801 is an anaerobe, mesophilic bacterium that was isolated from oil-polluted estuarine sediment.

NCBI tax id

• NCBI tax id: 1117177
• Matching level: species

strain history

doi: 10.13145/bacdive23893.20230509.8.1

Name and taxonomic classification

LPSN

• @ref: 20215
• description: domain/bacteria
• keyword: phylum/pseudomonadota
• domain: Bacteria
• phylum: Pseudomonadota
• class: Deltaproteobacteria
• order: Desulfobacterales
• family: Desulfobacteraceae
• genus: Desulfatiferula
• species: Desulfatiferula berrensis
• full scientific name: Desulfatiferula berrensis Hakil et al. 2014

@ref: 20527

domain: Bacteria

phylum: Proteobacteria

class: Deltaproteobacteria

order: Desulfobacterales

family: Desulfobacteraceae

genus: Desulfatiferula

species: Desulfatiferula berrensis

full scientific name: Desulfatiferula berrensis Hakil et al. 2014

strain designation: BE2801

type strain: yes

Morphology

colony morphology

• @ref: 20527
• incubation period: 8-14 days

Culture and growth conditions

culture medium

• @ref: 20527
• name: DESULFOBACTER MEDIUM (DSMZ Medium 193)
• growth: yes
• link: https://mediadive.dsmz.de/medium/193
• composition: Name: DESULFOBACTER MEDIUM (DSMZ Medium 193; with strain-specific modifications) Composition: NaCl 6.97906 g/l Na2SO4 2.99102 g/l Na2CO3 1.49551 g/l MgCl2 x 6 H2O 1.29611 g/l KCl 0.498505 g/l Na2S x 9 H2O 0.398804 g/l None 0.329013 g/l NH4Cl 0.299102 g/l KH2PO4 0.199402 g/l CaCl2 x 2 H2O 0.149552 g/l HCl 0.00249252 g/l FeCl2 x 4 H2O 0.00149551 g/l Sodium resazurin 0.000498505 g/l NaOH 0.000498504 g/l CoCl2 x 6 H2O 0.000189432 g/l Pyridoxine hydrochloride 9.97009e-05 g/l MnCl2 x 4 H2O 9.97009e-05 g/l ZnCl2 6.97906e-05 g/l p-Aminobenzoic acid 4.98504e-05 g/l (DL)-alpha-Lipoic acid 4.98504e-05 g/l Riboflavin 4.98504e-05 g/l Calcium D-(+)-pantothenate 4.98504e-05 g/l Thiamine HCl 4.98504e-05 g/l Nicotinic acid 4.98504e-05 g/l Na2MoO4 x 2 H2O 3.58923e-05 g/l NiCl2 x 6 H2O 2.39282e-05 g/l Biotin 1.99402e-05 g/l Folic acid 1.99402e-05 g/l H3BO3 5.98205e-06 g/l Na2WO4 x 2 H2O 3.98804e-06 g/l Na2SeO3 x 5 H2O 2.99103e-06 g/l CuCl2 x 2 H2O 1.99402e-06 g/l Vitamin B12 9.97009e-07 g/l Distilled water

culture temp

Physiology and metabolism

oxygen tolerance

• @ref: 20527
• oxygen tolerance: anaerobe

Isolation, sampling and environmental information

isolation

isolation source categories

Safety information

risk assessment

• @ref: 20527
• biosafety level: 1
• biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

• @ref: 20527
• description: Desulfatiferula berrensis partial 16S rRNA gene, type strain BE2801T
• accession: HE613444
• length: 1417
• database: ena
• NCBI tax ID: 1117177

GC content

• @ref: 20527
• GC-content: 50.2
• method: high performance liquid chromatography (HPLC)

External links

@ref: 20527

culture collection no.: DSM 25524, JCM 18157

straininfo link

• @ref: 87903
• straininfo: 397920

literature

• topic: Phylogeny
• Pubmed-ID: 24123201
• title: Desulfatiferula berrensis sp. nov., a n-alkene-degrading sulfate-reducing bacterium isolated from estuarine sediments.
• authors: Hakil F, Amin-Ali O, Hirschler-Rea A, Mollex D, Grossi V, Duran R, Matheron R, Cravo-Laureau C
• journal: Int J Syst Evol Microbiol
• DOI: 10.1099/ijs.0.057174-0
• year: 2013
• mesh: Base Composition, DNA, Bacterial/genetics, Deltaproteobacteria/*classification/genetics/isolation & purification, *Estuaries, Fatty Acids/chemistry, France, Geologic Sediments/*microbiology, Molecular Sequence Data, Nucleic Acid Hybridization, Petroleum Pollution, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sulfur-Reducing Bacteria/classification/genetics/isolation & purification, Waste Water
• topic2: Enzymology

Reference