Strain identifier
BacDive ID: 23831
Type strain: 
Species: Phenylobacterium haematophilum
Strain Designation: LGAS04, L6AS04
Strain history: <- M. Rodriguez-Diaz, Max-Planck-Inst. Marine Microbiology, Bremen, Germany; L6AS04 <- M. Rodríguez-Díaz, University of Granada, Institute of water research
NCBI tax ID(s): 98513 (species)
General
@ref: 20731
BacDive-ID: 23831
DSM-Number: 25210
keywords: 16S sequence, Bacteria, mesophilic
description: Phenylobacterium haematophilum LGAS04 is a mesophilic bacterium that was isolated from soil.
NCBI tax id
- NCBI tax id: 98513
- Matching level: species
strain history
- @ref: 20731
- history: <- M. Rodriguez-Diaz, Max-Planck-Inst. Marine Microbiology, Bremen, Germany; L6AS04 <- M. Rodríguez-Díaz, University of Granada, Institute of water research
doi: 10.13145/bacdive23831.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Alphaproteobacteria
- order: Caulobacterales
- family: Caulobacteraceae
- genus: Phenylobacterium
- species: Phenylobacterium haematophilum
- full scientific name: Phenylobacterium haematophilum Abraham et al. 2008
@ref: 20731
domain: Bacteria
phylum: Proteobacteria
class: Alphaproteobacteria
order: Rhizobiales
family: Caulobacteraceae
genus: Phenylobacterium
species: Phenylobacterium haematophilum
full scientific name: Phenylobacterium haematophilum Abraham et al. 2008
strain designation: LGAS04, L6AS04
type strain: no
Morphology
colony morphology
- @ref: 20731
- incubation period: 3-7 days
Culture and growth conditions
culture medium
- @ref: 20731
- name: R2A MEDIUM (DSMZ Medium 830)
- growth: yes
- link: https://mediadive.dsmz.de/medium/830
- composition: Name: R2A MEDIUM (DSMZ Medium 830) Composition: Agar 15.0 g/l Casamino acids 0.5 g/l Starch 0.5 g/l Glucose 0.5 g/l Proteose peptone 0.5 g/l Yeast extract 0.5 g/l K2HPO4 0.3 g/l Na-pyruvate 0.3 g/l MgSO4 x 7 H2O 0.05 g/l Distilled water
culture temp
- @ref: 20731
- growth: positive
- type: growth
- temperature: 35
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 20731
- sample type: soil
- geographic location: Granada, surroundings
- country: Spain
- origin.country: ESP
- continent: Europe
isolation source categories
- Cat1: #Environmental
- Cat2: #Terrestrial
- Cat3: #Soil
taxonmaps
- @ref: 69479
- File name: preview.99_20544.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_73;96_931;97_3078;98_3864;99_20544&stattab=map
- Last taxonomy: Phenylobacterium haematophilum subclade
- 16S sequence: JN609446
- Sequence Identity:
- Total samples: 13779
- soil counts: 4761
- aquatic counts: 3973
- animal counts: 2399
- plant counts: 2646
Sequence information
16S sequences
- @ref: 20731
- description: Caulobacter sp. L6AS04 16S ribosomal RNA gene, partial sequence
- accession: JN609446
- length: 1388
- database: ena
- NCBI tax ID: 1142104
External links
@ref: 20731
culture collection no.: DSM 25210
straininfo link
- @ref: 87856
- straininfo: 394852
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 20731 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-25210 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 25210) | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ | |
| 87856 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID394852.1 |