Strain identifier
BacDive ID: 2383
Type strain: 
Species: Oerskovia jenensis
Strain history: DSM 46001 <-- IMET 7011 <-- U. Taubeneck.
NCBI tax ID(s): 162169 (species)
version 9.2 (current version)
General
@ref: 12275
BacDive-ID: 2383
DSM-Number: 46001
keywords: 16S sequence, Bacteria, mesophilic
description: Oerskovia jenensis DSM 46001 is a mesophilic bacterium that was isolated from brookled-bed.
NCBI tax id
- NCBI tax id: 162169
- Matching level: species
strain history
| @ref | history |
|---|---|
| 12275 | <- IMET (Oerskovia turbata) <- U. Taubeneck |
| 67770 | DSM 46001 <-- IMET 7011 <-- U. Taubeneck. |
doi: 10.13145/bacdive2383.20241212.9.2
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Micrococcales
- family: Promicromonosporaceae
- genus: Oerskovia
- species: Oerskovia jenensis
- full scientific name: Oerskovia jenensis Stackebrandt et al. 2002
@ref: 12275
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Promicromonosporaceae
genus: Oerskovia
species: Oerskovia jenensis
full scientific name: Oerskovia jenensis Stackebrandt et al. 2002
type strain: no
Culture and growth conditions
culture medium
| @ref | name | growth | link | composition |
|---|---|---|---|---|
| 12275 | GYM+S MEDIUM (DSMZ Medium 214) | yes | https://mediadive.dsmz.de/medium/214 | Name: GYM+S MEDIUM (DSMZ Medium 214) Composition: Starch 20.0 g/l Agar 12.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water |
| 12275 | ORGANIC MEDIUM 79 (DSMZ Medium 426) | yes | https://mediadive.dsmz.de/medium/426 | Name: ORGANIC MEDIUM 79 (DSMZ Medium 426) Composition: Agar 15.0 g/l Peptone 10.0 g/l Dextrose 10.0 g/l NaCl 6.0 g/l Yeast extract 2.0 g/l Casein peptone 2.0 g/l Distilled water |
culture temp
| @ref | growth | type | temperature |
|---|---|---|---|
| 12275 | positive | growth | 28 |
| 67770 | positive | growth | 30 |
Physiology and metabolism
murein
- @ref: 12275
- murein short key: A11.57
- type: A4alpha L-Lys-L-Thr-D-Glu
observation
- @ref: 67770
- observation: quinones: MK-9(H4)
Isolation, sampling and environmental information
isolation
| @ref | sample type | geographic location | country | origin.country | continent |
|---|---|---|---|---|---|
| 12275 | brookled-bed | Harz Mountains | Germany | DEU | Europe |
| 67770 | Soil |
isolation source categories
- Cat1: #Environmental
- Cat2: #Aquatic
taxonmaps
- @ref: 69479
- File name: preview.99_702.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_9;96_432;97_493;98_564;99_702&stattab=map
- Last taxonomy: Oerskovia
- 16S sequence: AJ314849
- Sequence Identity:
- Total samples: 10823
- soil counts: 3597
- aquatic counts: 1485
- animal counts: 1997
- plant counts: 3744
Safety information
risk assessment
- @ref: 12275
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 12275
- description: Oerskovia jenensis 16S rRNA gene, strain DSM 46001
- accession: AJ314849
- length: 1479
- database: nuccore
- NCBI tax ID: 162169
External links
@ref: 12275
culture collection no.: DSM 46001, IMET 7011, JCM 9970
straininfo link
- @ref: 71938
- straininfo: 50684
Reference
| @id | authors | catalogue | doi/url | title |
|---|---|---|---|---|
| 12275 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 46001) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-46001 | |
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta | |
| 71938 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID50684.1 | StrainInfo: A central database for resolving microbial strain identifiers |