Workshop and Q&A October 6th

Strain identifier

BacDive ID: 23814

Type strain: No

Species: Burkholderia sp.

Strain Designation: 597-05-1, ID 98-272, PB1

Strain history: <- A. Schippers, BGR Hannover; CN8 <- P. Blumenroth

NCBI tax ID(s): 36773 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 20487

BacDive-ID: 23814

DSM-Number: 28456

keywords: mesophilic, Bacteria

description: Burkholderia sp. 597-05-1 is a mesophilic bacterium that was isolated from sediment, tailings Bozinta.

NCBI tax id

  • NCBI tax id: 36773
  • Matching level: species

strain history: <- A. Schippers, BGR Hannover; CN8 <- P. Blumenroth

doi: 10.13145/bacdive23814.20220920.7

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Betaproteobacteria
  • order: Burkholderiales
  • family: Burkholderiaceae
  • genus: Burkholderia
  • species: Burkholderia sp.
  • full scientific name: Burkholderia Yabuuchi et al. 1993

@ref: 20487

domain: Bacteria

phylum: Proteobacteria

class: Betaproteobacteria

order: Burkholderiales

family: Burkholderiaceae

genus: Burkholderia

species: Burkholderia sp.

full scientific name: Burkholderia sp.

strain designation: 597-05-1, ID 98-272, PB1

type strain: no

Morphology

colony morphology

  • @ref: 20487
  • type of hemolysis: gamma
  • incubation period: 1-2 days

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
20487TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)yeshttps://bacmedia.dsmz.de/medium/535Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water
20487NUTRIENT AGAR (DSMZ Medium 1)yeshttps://bacmedia.dsmz.de/medium/1Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water

culture temp

  • @ref: 20487
  • growth: positive
  • type: growth
  • temperature: 30
  • range: mesophilic

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6836925115malate+assimilation
6836917128adipate-assimilation
6836927689decanoate+assimilation
6836924265gluconate+assimilation
6836917306maltose-assimilation
6836959640N-acetylglucosamine+assimilation
6836916899D-mannitol+assimilation
6836916024D-mannose+assimilation
6836930849L-arabinose+assimilation
6836917634D-glucose+assimilation
683695291gelatin-hydrolysis
683694853esculin-hydrolysis
6836916199urea-hydrolysis
6836929016arginine-hydrolysis
6836927897tryptophan-energy source
6836917632nitrate-reduction

metabolite production

  • @ref: 68369
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

  • @ref: 68369
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: -

enzymes

@refvalueactivityec
20487catalase+1.11.1.6
20487cytochrome-c oxidase+1.9.3.1
68369gelatinase-
68369beta-glucosidase-3.2.1.21
68369urease-3.5.1.5
68369arginine dihydrolase-3.5.3.6

API 20NE

@refNO3TRPGLU_ FermADH ArgUREESCGELPNPGGLU_ AssimARAMNEMANNAGMALGNTCAPADIMLTCITPAC
20487--+/-----++++++-++-+++

Isolation, sampling and environmental information

isolation

  • @ref: 20487
  • sample type: sediment, tailings Bozinta
  • geographic location: Baia Mare
  • country: Romania
  • origin.country: ROU
  • continent: Europe

isolation source categories

  • Cat1: #Environmental
  • Cat2: #Aquatic
  • Cat3: #Sediment

External links

@ref: 20487

culture collection no.: DSM 28456, CN 8

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
20487Curators of the DSMZhttps://www.dsmz.de/collection/catalogue/details/culture/DSM-28456Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 28456)
68369Automatically annotated from API 20NE