Strain identifier

BacDive ID: 238

Type strain: No

Species: Aeromonas hydrophila subsp. hydrophila

Strain Designation: LRA 3300776, LRA 330 07 76

Strain history: CIP <- 1993, R. Mercier, BioMérieux, La Balme les Grottes, France: strain LRA 330 07 76 <- Analytab, Plainview, USA

NCBI tax ID(s): 196023 (subspecies)

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General

@ref: 2457

BacDive-ID: 238

DSM-Number: 6173

keywords: 16S sequence, Bacteria, aerobe, mesophilic, Gram-negative, motile, rod-shaped, human pathogen

description: Aeromonas hydrophila subsp. hydrophila LRA 3300776 is an aerobe, mesophilic, Gram-negative human pathogen of the family Aeromonadaceae.

NCBI tax id

  • NCBI tax id: 196023
  • Matching level: subspecies

strain history

@refhistory
2457<- ATCC; ATCC 35654 <- D. Androphy; LRA 3300776 <- bioMerieux; API SA
120009CIP <- 1993, R. Mercier, BioMérieux, La Balme les Grottes, France: strain LRA 330 07 76 <- Analytab, Plainview, USA

doi: 10.13145/bacdive238.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Aeromonadales
  • family: Aeromonadaceae
  • genus: Aeromonas
  • species: Aeromonas hydrophila subsp. hydrophila
  • full scientific name: Aeromonas hydrophila subsp. hydrophila (Chester 1901) Schubert 1964 (Approved Lists 1980)

@ref: 2457

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Aeromonadales

family: Aeromonadaceae

genus: Aeromonas

species: Aeromonas hydrophila subsp. hydrophila

full scientific name: Aeromonas hydrophila subsp. hydrophila (Chester 1901) Schubert 1964 emend. Huys et al. 2002

strain designation: LRA 3300776, LRA 330 07 76

type strain: no

Morphology

cell morphology

  • @ref: 120009
  • gram stain: negative
  • cell shape: rod-shaped
  • motility: yes

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
2457TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)yeshttps://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium92.pdf
2457COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)yeshttps://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium693.pdf
41052MEDIUM 72- for trypto casein soja agaryesDistilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g)
120009CIP Medium 72yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=72
120009CIP Medium 3yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=3

culture temp

@refgrowthtypetemperaturerange
41052positivegrowth30mesophilic
2457positivegrowth30mesophilic
49964positivegrowth30mesophilic
120009positivegrowth30-41

Physiology and metabolism

oxygen tolerance

@refoxygen tolerance
49964aerobe
120009facultative anaerobe

halophily

@refsaltgrowthtested relationconcentration
120009NaClpositivegrowth0-4 %
120009NaClnogrowth6 %
120009NaClnogrowth8 %
120009NaClnogrowth10 %

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6836925115malate+assimilation
6836917128adipate-assimilation
6836927689decanoate+assimilation
6836924265gluconate+assimilation
6836917306maltose+assimilation
6836959640N-acetylglucosamine+assimilation
6836916899D-mannitol+assimilation
6836916024D-mannose+assimilation
6836930849L-arabinose+assimilation
6836917634D-glucose+assimilation
683695291gelatin+hydrolysis
683694853esculin+hydrolysis
6836916199urea-hydrolysis
6836929016arginine+hydrolysis
6836917634D-glucose+fermentation
6836927897tryptophan+energy source
6836917632nitrate+reduction
6836830849L-arabinose+fermentation
6836827613amygdalin+fermentation
6836828053melibiose-fermentation
6836817992sucrose-fermentation
6836862345L-rhamnose-fermentation
6836830911sorbitol-fermentation
6836817268myo-inositol-fermentation
6836816899D-mannitol+fermentation
6836817634D-glucose+fermentation
683685291gelatin+hydrolysis
6836827897tryptophan+energy source
6836816199urea-hydrolysis
6836816947citrate-assimilation
6836818257ornithine-degradation
6836825094lysine-degradation
6836829016arginine+hydrolysis
12000916947citrate+carbon source
12000917632nitrate+reduction
12000916301nitrite+reduction
120009132112sodium thiosulfate-builds gas from
12000917632nitrate+respiration
6837418257ornithine-degradation
6837429016arginine+hydrolysis
6837425094lysine-degradation
6837416199urea-hydrolysis
6837418403L-arabitol-builds acid from
6837418024D-galacturonic acid-builds acid from
68374Potassium 5-ketogluconate-builds acid from
6837416899D-mannitol+builds acid from
6837417306maltose+builds acid from
6837415963ribitol-builds acid from
6837418394palatinose-builds acid from
6837415792malonate-assimilation
6837427897tryptophan+energy source
6837417634D-glucose+builds acid from
6837417992sucrose-builds acid from
6837430849L-arabinose+builds acid from
6837418333D-arabitol-builds acid from
6837427082trehalose+builds acid from
6837462345L-rhamnose-builds acid from
6837417268myo-inositol-builds acid from
6837417057cellobiose-builds acid from
6837430911sorbitol-builds acid from

antibiotic resistance

  • @ref: 120009
  • metabolite: 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)
  • is antibiotic: yes
  • is sensitive: no
  • is resistant: yes

metabolite production

@refChebi-IDmetaboliteproduction
6837435581indoleyes
6836935581indoleyes
6836815688acetoinyes
6836835581indoleyes
6836816136hydrogen sulfideno

metabolite tests

@refChebi-IDmetaboliteindole testvoges-proskauer-test
6837435581indole+
6836935581indole+
6836815688acetoin+
6836835581indole+

enzymes

@refvalueactivityec
68374L-aspartate arylamidase-3.4.11.21
68374alpha-maltosidase-
68374alpha-galactosidase-3.2.1.22
68374alpha-glucosidase-3.2.1.20
68374beta-galactosidase+3.2.1.23
68374N-acetyl-beta-glucosaminidase+3.2.1.52
68374beta-glucuronidase-3.2.1.31
68374beta-glucosidase+3.2.1.21
68374lipase+
68374urease-3.5.1.5
68374lysine decarboxylase-4.1.1.18
68374arginine dihydrolase+3.5.3.6
68374ornithine decarboxylase-4.1.1.17
68369cytochrome oxidase+1.9.3.1
68369gelatinase+
68369beta-glucosidase+3.2.1.21
68369urease-3.5.1.5
68369arginine dihydrolase+3.5.3.6
68368cytochrome oxidase+1.9.3.1
68368gelatinase+
68368tryptophan deaminase-4.1.99.1
68368urease-3.5.1.5
68368ornithine decarboxylase-4.1.1.17
68368lysine decarboxylase-4.1.1.18
68368arginine dihydrolase+3.5.3.6
68368beta-galactosidase+3.2.1.23
120009oxidase+
120009beta-galactosidase+3.2.1.23
120009alcohol dehydrogenase+1.1.1.1
120009gelatinase+
120009amylase+
120009DNase+
120009catalase+1.11.1.6
120009tween esterase+
120009gamma-glutamyltransferase-2.3.2.2
120009lecithinase+
120009lysine decarboxylase-4.1.1.18
120009ornithine decarboxylase-4.1.1.17

API 20E

@refONPGADH ArgLDC LysODCCITH2SURETDA TrpINDVPGELGLUMANINOSorRHASACMELAMYARAOX
49964++------+++++-----+++

API 20NE

@refNO3TRPGLU_ FermADH ArgUREESCGELPNPGGLU_ AssimARAMNEMANNAGMALGNTCAPADIMLTCITPACOX
2457++++-+++++++++++-++-+
2457++++-+++++++++++-+--+
2457++++-+++++++++++-+--+

API ID32E

@refODCADH ArgLDC LysURELARLGAT5KGLIPRPbeta GLUMANMALADOPLEbeta GURMNTINDbeta NAGbeta GALGLUSACLARADARLalpha GLUalpha GALTRERHAINOCELSORalphaMALAspA
49964-+-----+-+++----++++-+---+------

API biotype100

@refGLUFRUGALTREMNESBEMELSACRAFMTEMALLACLTEMbGaMaGaCELGENMbGuESCRIBARAXYLPLERHAFUCMLZDARLLARLXLTDULTAGGLYINOMANMTLTURSORADOHBGLYXERYMDG3MDGSATMUCLTATDTATMTATDMLTLMLTCATETATETTECITGRTGAT2KG5KGTRYNAGGNTPACPATpOBEQATGTEmOBEBATPPATCMTTGEBETPCEABTHINLATCAPCYTHISSUCFUMGREGYTAVTETNTTNGLNITA3OBUAPTGTTPRODALALALASERMNTPROPTYR2KT
120009+++++----++--+---++++----------+-+--------+------+---------++-----------++-++--++-+---+--++++++--+-

Isolation, sampling and environmental information

isolation

  • @ref: 120009
  • isolation date: 1976

taxonmaps

  • @ref: 69479
  • File name: preview.99_49.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_11;96_15;97_15;98_18;99_49&stattab=map
  • Last taxonomy: Aeromonas
  • 16S sequence: X74676
  • Sequence Identity:
  • Total samples: 5774
  • soil counts: 541
  • aquatic counts: 3538
  • animal counts: 1487
  • plant counts: 208

Safety information

risk assessment

@refpathogenicity humanpathogenicity animalbiosafety levelbiosafety level comment
2457yesyes2Risk group (German classification)
1200091Risk group (French classification)

Sequence information

16S sequences

  • @ref: 20218
  • description: A.hydrophila (ATCC 35654) gene for 16S ribosomal RNA
  • accession: X74676
  • length: 1460
  • database: ena
  • NCBI tax ID: 644

External links

@ref: 2457

culture collection no.: CCUG 30208, LMG 18245, CIP 103697, DSM 6173, ATCC 35654, API SA

straininfo link

  • @ref: 69921
  • straininfo: 11488

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
2457Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 6173)https://www.dsmz.de/collection/catalogue/details/culture/DSM-6173
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
41052Curators of the CIPhttps://brclims.pasteur.fr/brcWeb/souche/detail/1/15523
49964Curators of the CCUGCulture Collection University of Gothenburg (CCUG) (CCUG 30208)https://www.ccug.se/strain?id=30208
68368Automatically annotated from API 20E
68369Automatically annotated from API 20NE
68374Automatically annotated from API ID32E
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.https://microbeatlas.org/MicrobeAtlas 1.0 beta
69921Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID11488.1StrainInfo: A central database for resolving microbial strain identifiers
120009Curators of the CIPCollection of Institut Pasteur (CIP 103697)https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20103697