Strain identifier
BacDive ID: 23516
Type strain: 
Species: Acidobacterium sp.
Strain Designation: Ellin5413
Strain history: <- M. Sait, Dept. Molecular Biology, Univ. Wyoming, Laramie, USA; Ellin5413 <- C. A. Osborne and P. H. Janssen
NCBI tax ID(s): 1872119 (species)
General
@ref: 20234
BacDive-ID: 23516
DSM-Number: 22743
keywords: 16S sequence, Bacteria, mesophilic
description: Acidobacterium sp. Ellin5413 is a mesophilic bacterium that was isolated from pasture soil.
NCBI tax id
- NCBI tax id: 1872119
- Matching level: species
strain history
- @ref: 20234
- history: <- M. Sait, Dept. Molecular Biology, Univ. Wyoming, Laramie, USA; Ellin5413 <- C. A. Osborne and P. H. Janssen
doi: 10.13145/bacdive23516.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/acidobacteriota
- domain: Bacteria
- phylum: Acidobacteriota
- class: Terriglobia
- order: Terriglobales
- family: Acidobacteriaceae
- genus: Acidobacterium
- species: Acidobacterium sp.
- full scientific name: Acidobacterium Kishimoto et al. 1991
synonyms
- @ref: 20215
- synonym: Pseudacidobacterium
@ref: 20234
domain: Bacteria
phylum: Acidobacteria
class: Acidobacteriia
order: Acidobacteriales
family: Acidobacteriaceae
genus: Acidobacterium
species: Acidobacterium sp.
full scientific name: Acidobacterium sp.
strain designation: Ellin5413
type strain: no
Culture and growth conditions
culture medium
- @ref: 20234
- name: MEDIUM VL55 (DSMZ Medium 1266)
- growth: yes
- link: https://mediadive.dsmz.de/medium/1266
- composition: Name: MEDIUM VL55 (DSMZ Medium 1266) Composition: MES 1.9403 g/l FeCl2 x 4 H2O 0.00149254 g/l NaOH 0.000497512 g/l CoCl2 x 6 H2O 0.000189055 g/l Pyridoxamine hydrochloride 0.000149254 g/l MnCl2 x 4 H2O 9.95025e-05 g/l Nicotinic acid 9.85075e-05 g/l Thiamine-HCl x 2 H2O 9.85075e-05 g/l ZnCl2 6.96517e-05 g/l Vitamin B12 5.07463e-05 g/l Hemicalcium D-(+)-pantothenate 5.07463e-05 g/l 4-aminobenzoate 3.8806e-05 g/l Na2MoO4 x 2 H2O 3.58209e-05 g/l Riboflavin 2.98507e-05 g/l DL-6,8-thioctic acid 2.98507e-05 g/l NiCl2 x 6 H2O 2.38806e-05 g/l Folic acid 1.19403e-05 g/l Biotin 8.95522e-06 g/l H3BO3 5.97015e-06 g/l Na2WO4 x 2 H2O 3.9801e-06 g/l Na2SeO3 x 5 H2O 2.98507e-06 g/l CuCl2 x 2 H2O 1.99005e-06 g/l HCl (NH4)2HPO4 CaCl2 x 2 H2O MgSO4 x 7 H2O Glucose Distilled water
culture temp
- @ref: 20234
- growth: positive
- type: growth
- temperature: 25
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 20234
- sample type: pasture soil
- geographic location: Victoria, Ellinbank
- country: Australia
- origin.country: AUS
- continent: Australia and Oceania
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Environmental | #Terrestrial | #Soil |
| #Engineered | #Agriculture | #Meadow |
| #Environmental | #Terrestrial | #Grassland |
Sequence information
16S sequences
- @ref: 20234
- description: Acidobacteria bacterium Ellin5413 16S ribosomal RNA gene, partial sequence
- accession: AY673140
- length: 418
- database: ena
- NCBI tax ID: 305073
External links
@ref: 20234
culture collection no.: DSM 22743
straininfo link
- @ref: 87623
- straininfo: 397522
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 20234 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-22743 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 22743) | |
| 87623 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID397522.1 |