Strain identifier
BacDive ID: 23515
Type strain:
Species: Acidobacterium sp.
Strain Designation: Ellin337
Strain history: <- M. Sait, Dept. Molecular Biology, Univ. Wyoming, Laramie, USA; Ellin337 <- M. Sait and P. H. Janssen
NCBI tax ID(s): 1872119 (species)
General
@ref: 20233
BacDive-ID: 23515
DSM-Number: 22488
keywords: 16S sequence, Bacteria, mesophilic
description: Acidobacterium sp. Ellin337 is a mesophilic bacterium that was isolated from pasture soil.
NCBI tax id
- NCBI tax id: 1872119
- Matching level: species
strain history
- @ref: 20233
- history: <- M. Sait, Dept. Molecular Biology, Univ. Wyoming, Laramie, USA; Ellin337 <- M. Sait and P. H. Janssen
doi: 10.13145/bacdive23515.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/acidobacteriota
- domain: Bacteria
- phylum: Acidobacteriota
- class: Terriglobia
- order: Terriglobales
- family: Acidobacteriaceae
- genus: Acidobacterium
- species: Acidobacterium sp.
- full scientific name: Acidobacterium Kishimoto et al. 1991
synonyms
- @ref: 20215
- synonym: Pseudacidobacterium
@ref: 20233
domain: Bacteria
phylum: Acidobacteria
class: Acidobacteriia
order: Acidobacteriales
family: Acidobacteriaceae
genus: Acidobacterium
species: Acidobacterium sp.
full scientific name: Acidobacterium sp.
strain designation: Ellin337
type strain: no
Culture and growth conditions
culture medium
- @ref: 20233
- name: MEDIUM VL55 (DSMZ Medium 1266)
- growth: yes
- link: https://mediadive.dsmz.de/medium/1266
- composition: Name: MEDIUM VL55 (DSMZ Medium 1266) Composition: MES 1.9403 g/l FeCl2 x 4 H2O 0.00149254 g/l NaOH 0.000497512 g/l CoCl2 x 6 H2O 0.000189055 g/l Pyridoxamine hydrochloride 0.000149254 g/l MnCl2 x 4 H2O 9.95025e-05 g/l Nicotinic acid 9.85075e-05 g/l Thiamine-HCl x 2 H2O 9.85075e-05 g/l ZnCl2 6.96517e-05 g/l Vitamin B12 5.07463e-05 g/l Hemicalcium D-(+)-pantothenate 5.07463e-05 g/l 4-aminobenzoate 3.8806e-05 g/l Na2MoO4 x 2 H2O 3.58209e-05 g/l Riboflavin 2.98507e-05 g/l DL-6,8-thioctic acid 2.98507e-05 g/l NiCl2 x 6 H2O 2.38806e-05 g/l Folic acid 1.19403e-05 g/l Biotin 8.95522e-06 g/l H3BO3 5.97015e-06 g/l Na2WO4 x 2 H2O 3.9801e-06 g/l Na2SeO3 x 5 H2O 2.98507e-06 g/l CuCl2 x 2 H2O 1.99005e-06 g/l HCl (NH4)2HPO4 CaCl2 x 2 H2O MgSO4 x 7 H2O Glucose Distilled water
culture temp
- @ref: 20233
- growth: positive
- type: growth
- temperature: 25
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 20233
- sample type: pasture soil
- geographic location: Victoria, Ellinbank
- country: Australia
- origin.country: AUS
- continent: Australia and Oceania
isolation source categories
Cat1 | Cat2 | Cat3 |
---|---|---|
#Environmental | #Terrestrial | #Soil |
#Engineered | #Agriculture | #Meadow |
#Environmental | #Terrestrial | #Grassland |
taxonmaps
- @ref: 69479
- File name: preview.99_182429.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_236;96_882;97_1030;98_1219;99_182429&stattab=map
- Last taxonomy: Edaphobacter modestus
- 16S sequence: AF498719
- Sequence Identity:
- Total samples: 157
- soil counts: 150
- aquatic counts: 1
- animal counts: 3
- plant counts: 3
Sequence information
16S sequences
- @ref: 20233
- description: Bacterium Ellin337 16S ribosomal RNA gene, partial sequence
- accession: AF498719
- length: 1413
- database: ena
- NCBI tax ID: 204667
External links
@ref: 20233
culture collection no.: DSM 22488
straininfo link
- @ref: 87622
- straininfo: 407531
Reference
@id | authors | title | doi/url | catalogue |
---|---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
20233 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-22488 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 22488) | |
69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ | |
87622 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID407531.1 |