General

@ref: 4675

BacDive-ID: 23386

DSM-Number: 12567

keywords: 16S sequence, anaerobe, mesophilic

description: unclassified bacterium mXyS1 is an anaerobe, mesophilic prokaryote that was isolated from seawater phase in oil tank of ß-refinery.

NCBI tax id

• NCBI tax id: 1869227
• Matching level: species

strain history

• @ref: 4675
• history: <- G. Harms, Max-Planck-Inst. Marine Microbiology, Bremen, Germany; mXyS1 <- G. Harms {1996}

doi: 10.13145/bacdive23386.20230509.8.1

Name and taxonomic classification

@ref: 4675

phylum: Not assigned to order

class: Not assigned to order

order: Clostridiales

family: Not assigned to family

genus: unclassified

species: unclassified bacterium

full scientific name: unclassified bacterium

strain designation: mXyS1

type strain: no

Culture and growth conditions

culture medium

• @ref: 4675
• name: DESULFOBACTERIUM MEDIUM (DSMZ Medium 383)
• growth: yes
• link: https://mediadive.dsmz.de/medium/383
• composition: Name: DESULFOBACTERIUM MEDIUM (DSMZ Medium 383; with strain-specific modifications) Composition: NaCl 20.9372 g/l MgCl2 x 6 H2O 2.99103 g/l Na2SO4 2.99103 g/l Na2CO3 0.997009 g/l KCl 0.498504 g/l Na2S x 9 H2O 0.398804 g/l Na-benzoate 0.398804 g/l NH4Cl 0.299103 g/l KH2PO4 0.199402 g/l CaCl2 x 2 H2O 0.149551 g/l Yeast extract 0.0997009 g/l HCl 0.00249252 g/l FeCl2 x 4 H2O 0.00149551 g/l Sodium resazurin 0.000498504 g/l NaOH 0.000498504 g/l CoCl2 x 6 H2O 0.000189432 g/l Pyridoxine hydrochloride 9.97009e-05 g/l MnCl2 x 4 H2O 9.97009e-05 g/l ZnCl2 6.97906e-05 g/l Riboflavin 4.98504e-05 g/l Calcium D-(+)-pantothenate 4.98504e-05 g/l p-Aminobenzoic acid 4.98504e-05 g/l (DL)-alpha-Lipoic acid 4.98504e-05 g/l Nicotinic acid 4.98504e-05 g/l Thiamine HCl 4.98504e-05 g/l Na2MoO4 x 2 H2O 3.58923e-05 g/l NiCl2 x 6 H2O 2.39282e-05 g/l Biotin 1.99402e-05 g/l Folic acid 1.99402e-05 g/l H3BO3 5.98205e-06 g/l Na2WO4 x 2 H2O 3.98804e-06 g/l Na2SeO3 x 5 H2O 2.99103e-06 g/l CuCl2 x 2 H2O 1.99402e-06 g/l Vitamin B12 9.97009e-07 g/l Distilled water

culture temp

• @ref: 4675
• growth: positive
• type: growth
• temperature: 25
• range: mesophilic

Physiology and metabolism

oxygen tolerance

• @ref: 4675
• oxygen tolerance: anaerobe

Isolation, sampling and environmental information

isolation

• @ref: 4675
• sample type: seawater phase in oil tank of ß-refinery
• geographic location: Wilhelmshaven
• country: Germany
• origin.country: DEU
• continent: Europe

isolation source categories

taxonmaps

• @ref: 69479
• File name: preview.99_31852.png
• url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_433;96_2000;97_18953;98_23642;99_31852&stattab=map
• Last taxonomy: Desulfobacteraceae
• 16S sequence: AJ006853
• Sequence Identity:
• Total samples: 21
• soil counts: 3
• aquatic counts: 18

Sequence information

16S sequences

• @ref: 4675
• description: sulfate-reducing bacterium 16S ribosomal RNA, strain mXyS1
• accession: AJ006853
• length: 1531
• database: ena
• NCBI tax ID: 77631

GC content

• @ref: 4675
• GC-content: 49.2
• method: high performance liquid chromatography (HPLC)

External links

@ref: 4675

culture collection no.: DSM 12567

Reference