Strain identifier

BacDive ID: 23316

Type strain: Yes

Species: Streptomyces chiangmaiensis

Strain Designation: TA4-1

Strain history: P. Chantawannakul TA4-1.

NCBI tax ID(s): 766497 (species)

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General

@ref: 19318

BacDive-ID: 23316

DSM-Number: 42092

keywords: 16S sequence, Bacteria, aerobe, spore-forming, mesophilic, Gram-positive, ovoid-shaped

description: Streptomyces chiangmaiensis TA4-1 is an aerobe, spore-forming, mesophilic bacterium that was isolated from stingless bee .

NCBI tax id

  • NCBI tax id: 766497
  • Matching level: species

strain history

@refhistory
19318<- JCM; JCM 16577 <- P. Chantawannakul; TA4-1
67770P. Chantawannakul TA4-1.

doi: 10.13145/bacdive23316.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Kitasatosporales
  • family: Streptomycetaceae
  • genus: Streptomyces
  • species: Streptomyces chiangmaiensis
  • full scientific name: Streptomyces chiangmaiensis Promnuan et al. 2013

@ref: 19318

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Streptomycetaceae

genus: Streptomyces

species: Streptomyces chiangmaiensis

full scientific name: Streptomyces chiangmaiensis Promnuan et al. 2013

strain designation: TA4-1

type strain: yes

Morphology

cell morphology

  • @ref: 30853
  • gram stain: positive
  • cell shape: ovoid-shaped

colony morphology

@refcolony colormedium used
69342Ivory (1014)ISP 2
69342Ivory (1014)ISP 6
69342Light ivory (1015)ISP 4
69342Light ivory (1015)ISP 7
69342Light ivory (1015)suter with tyrosine
69342Light ivory (1015)suter without tyrosine
69342Oyster white (1013)ISP 3
69342Oyster white (1013), ivory (1014)ISP 5

multicellular morphology

@refforms multicellular complexcomplex namemedium name
69342noAerial myceliumISP 2
69342noAerial myceliumISP 3
69342noAerial myceliumISP 4
69342noAerial myceliumISP 5
69342noAerial myceliumISP 6
69342noAerial myceliumISP 7
69342noAerial myceliumsuter with tyrosine
69342noAerial myceliumsuter without tyrosine

pigmentation

@refproductionnamecolor
30853yes
69342noMelanin
69342yessoluble pigmentLight ivory (1015)

multimedia

@refmultimedia contentcaptionintellectual property rights
69342DSM_42092_image3.jpegPlates (65, ISP2, ISP3, ISP4, ISP5, ISP7)Helmholtz-Zentrum für Infektionsforschung GmbH
69342DSM_42092_image4.jpegPlates (65, ISP2, ISP3, ISP4, ISP5, ISP7)Helmholtz-Zentrum für Infektionsforschung GmbH

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
19318ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)yeshttps://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium84.pdf
19318STARCH - MINERAL SALT - AGAR (STMS) (DSMZ Medium 252)yeshttps://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium252.pdf
19318GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)yeshttps://mediadive.dsmz.de/medium/65Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water

culture temp

@refgrowthtypetemperaturerange
19318positivegrowth28mesophilic
30853positivegrowth20-30
30853positiveoptimum30mesophilic
67770positivegrowth28mesophilic

culture pH

@refabilitytypepHPH range
30853positivegrowth04-11alkaliphile
30853positiveoptimum8

Physiology and metabolism

oxygen tolerance

  • @ref: 30853
  • oxygen tolerance: aerobe

spore formation

  • @ref: 30853
  • spore formation: yes

halophily

@refsaltgrowthtested relationconcentration
30853NaClpositiveoptimum2 %
69342NaClpositivegrowth0 %

observation

@refobservation
30853aggregates in chains
67770quinones: MK-9(H8), MK-9(H6), MK-9(H10)

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6934222599arabinose+growth
3085322599arabinose+carbon source
3085317234glucose+carbon source
3085317268myo-inositol+carbon source
3085326546rhamnose+carbon source
3085318222xylose+carbon source
6934262968cellulose+/-growth
6934228757fructose+growth
6934217234glucose+growth
6934217268inositol+growth
6934237684mannose+growth
6934216634raffinose+/-growth
6934226546rhamnose-growth
6934217992sucrose+/-growth
6934218222xylose+growth
6837917632nitrate-reduction
683794853esculin-hydrolysis
6837916199urea-hydrolysis
6837917634D-glucose-fermentation
6837916988D-ribose-fermentation
6837965327D-xylose-fermentation
6837916899D-mannitol-fermentation
6837917306maltose-fermentation
6837917716lactose-fermentation
6837917992sucrose-fermentation
6837928087glycogen-fermentation

enzymes

@refvalueactivityec
68379urease-3.5.1.5
68379beta-glucosidase-3.2.1.21
68379N-acetyl-beta-glucosaminidase+3.2.1.52
68379alpha-glucosidase+3.2.1.20
68379beta-galactosidase-3.2.1.23
68379beta-glucuronidase-3.2.1.31
68379alkaline phosphatase+3.1.3.1
68379pyrrolidonyl arylamidase-3.4.19.3
68379pyrazinamidase-3.5.1.B15
68382alkaline phosphatase+3.1.3.1
68382leucine arylamidase+3.4.11.1
68382valine arylamidase+
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase+3.2.1.22
68382beta-galactosidase+3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase+3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase+3.2.1.52
68382alpha-mannosidase+3.2.1.24
68382alpha-fucosidase-3.2.1.51

API coryne

@refNITPYZPYRAPALbeta GURbeta GALalpha GLUbeta NAGESCUREGELGLURIBXYLMANMALLACSACGLYG
69342---+--++--+/---------

API zym

@refAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
69342++/-+/-+/-+++/-+/--++++-+-++-

Isolation, sampling and environmental information

isolation

@refsample typehost speciesgeographic locationcountryorigin.countrycontinent
19318stingless bee (Tetragonilla collina)Tetragonilla collinaChiang Mai ProvinceThailandTHAAsia
67770Stingless bee (Tetragonilla collina)Tetragonilla collinaChiang Mai ProvinceThailandTHAAsia

isolation source categories

  • Cat1: #Host
  • Cat2: #Arthropoda
  • Cat3: #Insecta

Safety information

risk assessment

  • @ref: 19318
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 19318
  • description: Streptomyces chiangmaiensis gene for 16S rRNA, partial sequence
  • accession: AB562507
  • length: 1510
  • database: ena
  • NCBI tax ID: 766497

GC content

@refGC-contentmethod
1931869.2high performance liquid chromatography (HPLC)
3085369.2

External links

@ref: 19318

culture collection no.: DSM 42092, JCM 16577, TISTR 1981

straininfo link

  • @ref: 87534
  • straininfo: 401020

literature

topicPubmed-IDtitleauthorsjournalDOIyearmeshtopic2
Phylogeny23002051Streptomyces chiangmaiensis sp. nov. and Streptomyces lannensis sp. nov., isolated from the South-East Asian stingless bee (Tetragonilla collina).Promnuan Y, Kudo T, Ohkuma M, Chantawannakul PInt J Syst Evol Microbiol10.1099/ijs.0.045930-02012Animals, Bacterial Typing Techniques, Base Composition, Bees/*microbiology, DNA, Bacterial/genetics, Diaminopimelic Acid/analysis, Fatty Acids/analysis, Molecular Sequence Data, Nucleic Acid Hybridization, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Streptomyces/*classification/genetics/isolation & purification, Thailand, Vitamin K 2/analogs & derivatives/analysisGenetics
Pathogenicity35425449Streptomyces chiangmaiensis SSUT88A mediated green synthesis of silver nanoparticles: characterization and evaluation of antibacterial action against clinical drug-resistant strains.Rosyidah A, Weeranantanapan O, Chudapongse N, Limphirat W, Nantapong NRSC Adv10.1039/d1ra08238h2022

Reference

@idauthorscataloguedoi/urltitleID_cross_referencepubmed
19318Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 42092)https://www.dsmz.de/collection/catalogue/details/culture/DSM-42092
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
30853Barberan A, Caceres Velazquez H, Jones S, Fierer N.10.1128/mSphere.00237-17Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information2718328776041
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
68379Automatically annotated from API Coryne
68382Automatically annotated from API zym
69342Wink, J.https://cdn.dsmz.de/wink/DSM%2042092.pdfCompendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig
87534Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID401020.1StrainInfo: A central database for resolving microbial strain identifiers