Strain identifier

BacDive ID: 23313

Type strain: Yes

Species: Streptomyces erringtonii

Strain Designation: I36

Strain history: <- KACC; KACC 15424

NCBI tax ID(s): 333728 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 19248

BacDive-ID: 23313

DSM-Number: 42088

keywords: 16S sequence, Bacteria, mesophilic

description: Streptomyces erringtonii I36 is a mesophilic bacterium that was isolated from hay meadow soil.

NCBI tax id

  • NCBI tax id: 333728
  • Matching level: species

strain history

  • @ref: 19248
  • history: <- KACC; KACC 15424

doi: 10.13145/bacdive23313.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Kitasatosporales
  • family: Streptomycetaceae
  • genus: Streptomyces
  • species: Streptomyces erringtonii
  • full scientific name: Streptomyces erringtonii Santhanam et al. 2013

@ref: 19248

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Streptomycetaceae

genus: Streptomyces

species: Streptomyces erringtonii

full scientific name: Streptomyces erringtonii Santhanam et al. 2013

strain designation: I36

type strain: yes

Morphology

multimedia

  • @ref: 19248
  • multimedia content: https://www.dsmz.de/microorganisms/photos/DSM_42088.jpg
  • caption: Medium 65 28°C
  • intellectual property rights: © Leibniz-Institut DSMZ

Culture and growth conditions

culture medium

  • @ref: 19248
  • name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/65
  • composition: Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water

culture temp

  • @ref: 19248
  • growth: positive
  • type: growth
  • temperature: 28
  • range: mesophilic

Isolation, sampling and environmental information

isolation

  • @ref: 19248
  • sample type: hay meadow soil
  • geographic location: Nothumberland, Cockle Park Experimental Farm, Palace Leas hay meadow plot 6
  • country: United Kingdom
  • origin.country: GBR
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Engineered#Agriculture#Meadow
#Environmental#Terrestrial#Soil
#Host#Plants#Herbaceous plants (Grass,Crops)

Safety information

risk assessment

  • @ref: 19248
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 19248
  • description: Streptomyces erringtonii partial 16S rRNA gene, type strain I36T
  • accession: HE573871
  • length: 1435
  • database: ena
  • NCBI tax ID: 333728

GC content

  • @ref: 19248
  • GC-content: 71.8
  • method: high performance liquid chromatography (HPLC)

External links

@ref: 19248

culture collection no.: DSM 42088, CGMCC 4.7016, KACC 15424

straininfo link

  • @ref: 87531
  • straininfo: 404446

literature

  • topic: Phylogeny
  • Pubmed-ID: 22865027
  • title: Streptomyces erringtonii sp. nov. and Streptomyces kaempferi sp. nov., isolated from a hay meadow soil.
  • authors: Santhanam R, Rong X, Huang Y, Goodfellow M
  • journal: Antonie Van Leeuwenhoek
  • DOI: 10.1007/s10482-012-9788-x
  • year: 2012
  • mesh: Bacterial Typing Techniques, Cluster Analysis, DNA, Bacterial/chemistry/genetics, DNA, Ribosomal/chemistry/genetics, Molecular Sequence Data, Nucleic Acid Hybridization, Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, *Soil Microbiology, Streptomyces/*classification/genetics/*isolation & purification/physiology
  • topic2: Genetics

Reference

@idauthorscataloguedoi/urltitle
19248Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 42088)https://www.dsmz.de/collection/catalogue/details/culture/DSM-42088
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
87531Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID404446.1StrainInfo: A central database for resolving microbial strain identifiers