Strain identifier
BacDive ID: 23313
Type strain:
Species: Streptomyces erringtonii
Strain Designation: I36
Strain history: <- KACC; KACC 15424
NCBI tax ID(s): 333728 (species)
General
@ref: 19248
BacDive-ID: 23313
DSM-Number: 42088
keywords: 16S sequence, Bacteria, mesophilic
description: Streptomyces erringtonii I36 is a mesophilic bacterium that was isolated from hay meadow soil.
NCBI tax id
- NCBI tax id: 333728
- Matching level: species
strain history
- @ref: 19248
- history: <- KACC; KACC 15424
doi: 10.13145/bacdive23313.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Kitasatosporales
- family: Streptomycetaceae
- genus: Streptomyces
- species: Streptomyces erringtonii
- full scientific name: Streptomyces erringtonii Santhanam et al. 2013
@ref: 19248
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Streptomycetaceae
genus: Streptomyces
species: Streptomyces erringtonii
full scientific name: Streptomyces erringtonii Santhanam et al. 2013
strain designation: I36
type strain: yes
Morphology
multimedia
- @ref: 19248
- multimedia content: https://www.dsmz.de/microorganisms/photos/DSM_42088.jpg
- caption: Medium 65 28°C
- intellectual property rights: © Leibniz-Institut DSMZ
Culture and growth conditions
culture medium
- @ref: 19248
- name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)
- growth: yes
- link: https://mediadive.dsmz.de/medium/65
- composition: Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
culture temp
- @ref: 19248
- growth: positive
- type: growth
- temperature: 28
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 19248
- sample type: hay meadow soil
- geographic location: Nothumberland, Cockle Park Experimental Farm, Palace Leas hay meadow plot 6
- country: United Kingdom
- origin.country: GBR
- continent: Europe
isolation source categories
Cat1 | Cat2 | Cat3 |
---|---|---|
#Engineered | #Agriculture | #Meadow |
#Environmental | #Terrestrial | #Soil |
#Host | #Plants | #Herbaceous plants (Grass,Crops) |
Safety information
risk assessment
- @ref: 19248
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 19248
- description: Streptomyces erringtonii partial 16S rRNA gene, type strain I36T
- accession: HE573871
- length: 1435
- database: ena
- NCBI tax ID: 333728
GC content
- @ref: 19248
- GC-content: 71.8
- method: high performance liquid chromatography (HPLC)
External links
@ref: 19248
culture collection no.: DSM 42088, CGMCC 4.7016, KACC 15424
straininfo link
- @ref: 87531
- straininfo: 404446
literature
- topic: Phylogeny
- Pubmed-ID: 22865027
- title: Streptomyces erringtonii sp. nov. and Streptomyces kaempferi sp. nov., isolated from a hay meadow soil.
- authors: Santhanam R, Rong X, Huang Y, Goodfellow M
- journal: Antonie Van Leeuwenhoek
- DOI: 10.1007/s10482-012-9788-x
- year: 2012
- mesh: Bacterial Typing Techniques, Cluster Analysis, DNA, Bacterial/chemistry/genetics, DNA, Ribosomal/chemistry/genetics, Molecular Sequence Data, Nucleic Acid Hybridization, Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, *Soil Microbiology, Streptomyces/*classification/genetics/*isolation & purification/physiology
- topic2: Genetics
Reference
@id | authors | catalogue | doi/url | title |
---|---|---|---|---|
19248 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 42088) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-42088 | |
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
87531 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID404446.1 | StrainInfo: A central database for resolving microbial strain identifiers |