Strain identifier
BacDive ID: 23255
Type strain: 
Species: Pedobacter sp.
Strain history: <- LMG <- P. L. Steyn
NCBI tax ID(s): 151899 (species)
version 8.1 (current version)
General
@ref: 18883
BacDive-ID: 23255
DSM-Number: 12165
keywords: 16S sequence, Bacteria, mesophilic
description: Pedobacter sp. DSM 12165 is a mesophilic bacterium that was isolated from soil.
NCBI tax id
- NCBI tax id: 151899
- Matching level: species
strain history
- @ref: 18883
- history: <- LMG <- P. L. Steyn
doi: 10.13145/bacdive23255.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacteroidota
- domain: Bacteria
- phylum: Bacteroidota
- class: Sphingobacteriia
- order: Sphingobacteriales
- family: Sphingobacteriaceae
- genus: Pedobacter
- species: Pedobacter sp.
- full scientific name: Pedobacter Steyn et al. 1998
@ref: 18883
domain: Bacteria
phylum: Bacteroidetes
class: Sphingobacteriia
order: Sphingobacteriales
family: Sphingobacteriaceae
genus: Pedobacter
species: Pedobacter sp.
full scientific name: Pedobacter sp.
type strain: no
Culture and growth conditions
culture medium
- @ref: 18883
- name: NUTRIENT AGAR (DSMZ Medium 1)
- growth: yes
- link: https://mediadive.dsmz.de/medium/1
- composition: Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water
culture temp
- @ref: 18883
- growth: positive
- type: growth
- temperature: 28
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 18883
- sample type: soil
- geographic location: Ephesos
- country: Turkey
- origin.country: TUR
- continent: Asia
isolation source categories
- Cat1: #Environmental
- Cat2: #Terrestrial
- Cat3: #Soil
Sequence information
16S sequences
- @ref: 18883
- description: Pedobacter sp. LMG 9525 16S ribosomal RNA gene, partial sequence
- accession: AF329962
- length: 681
- database: ena
- NCBI tax ID: 151899
External links
@ref: 18883
culture collection no.: DSM 12165, LMG 9525
straininfo link
- @ref: 87478
- straininfo: 11931
Reference
| @id | authors | catalogue | doi/url | title |
|---|---|---|---|---|
| 18883 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 12165) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-12165 | |
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
| 87478 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID11931.1 | StrainInfo: A central database for resolving microbial strain identifiers |