Strain identifier
BacDive ID: 23193
Type strain: 
Species: Planctomyces sp.
Strain Designation: AGA M18
Strain history: <- J. A. Fuerst, UQM; AGA M18
NCBI tax ID(s): 37635 (species)
version 9 (current version)
General
@ref: 18887
BacDive-ID: 23193
DSM-Number: 11908
keywords: 16S sequence, Bacteria
description: Planctomyces sp. AGA M18 is a bacterium that was isolated from postlarvae of the Giant Tiger Prawn .
NCBI tax id
- NCBI tax id: 37635
- Matching level: species
strain history
- @ref: 18887
- history: <- J. A. Fuerst, UQM; AGA M18
doi: 10.13145/bacdive23193.20240510.9
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/planctomycetota
- domain: Bacteria
- phylum: Planctomycetota
- class: Planctomycetia
- order: Planctomycetales
- family: Planctomycetaceae
- genus: Planctomyces
- species: Planctomyces sp.
- full scientific name: Planctomyces Gimesi 1924 (Approved Lists 1980)
@ref: 18887
domain: Bacteria
phylum: Planctomycetes
class: Planctomycetia
order: Planctomycetales
family: Planctomycetaceae
genus: Planctomyces
species: Planctomyces sp.
full scientific name: Planctomyces sp.
strain designation: AGA M18
type strain: no
Culture and growth conditions
culture medium
- @ref: 18887
- name: HALF STRENGTH BACTO MARINE BROTH (DSMZ Medium 514a)
- growth: yes
- link: https://mediadive.dsmz.de/medium/514a
- composition: Name: HALF STRENGTH BACTO MARINE BROTH (DSMZ Medium 514a) Composition: Agar 15.0 g/l NaCl 9.725 g/l MgCl2 2.95 g/l Bacto peptone 2.5 g/l Na2SO4 1.62 g/l CaCl2 0.9 g/l Yeast extract 0.5 g/l KCl 0.275 g/l NaHCO3 0.08 g/l Fe(III) citrate 0.05 g/l KBr 0.04 g/l SrCl2 0.017 g/l H3BO3 0.011 g/l Na2HPO4 0.004 g/l Na-silicate 0.002 g/l NaF 0.0012 g/l (NH4)NO3 0.0008 g/l Distilled water
culture temp
- @ref: 18887
- growth: positive
- type: growth
- temperature: 28
Isolation, sampling and environmental information
isolation
- @ref: 18887
- sample type: postlarvae of the Giant Tiger Prawn (Penaeus monodon)
- host species: Penaeus monodon
- country: Australia
- origin.country: AUS
- continent: Australia and Oceania
isolation source categories
- Cat1: #Host
- Cat2: #Arthropoda
- Cat3: #Crustacea
taxonmaps
- @ref: 69479
- File name: preview.99_100857.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_494;96_2399;97_2920;98_3645;99_100857&stattab=map
- Last taxonomy: Rubinisphaera brasiliensis subclade
- 16S sequence: X85249
- Sequence Identity:
- Total samples: 28
- aquatic counts: 27
- animal counts: 1
Sequence information
16S sequences
- @ref: 18887
- description: Planctomyces sp. 16S rRNA gene
- accession: X85249
- length: 1454
- database: nuccore
- NCBI tax ID: 37635
External links
@ref: 18887
culture collection no.: DSM 11908
straininfo link
- @ref: 87424
- straininfo: 397329
Reference
| @id | authors | catalogue | doi/url | title |
|---|---|---|---|---|
| 18887 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 11908) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-11908 | |
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta | |
| 87424 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID397329.1 | StrainInfo: A central database for resolving microbial strain identifiers |