Archive BacDiveID:10.13145/bacdive23130.20230509.8.1

Strain identifier

BacDive ID: 23130

Type strain:

Species: Psychrobacter muriicola

Strain Designation: 2 pS

Strain history: <- V. Shcherbakova, Inst. Biochem. Physiol. Microorg., RAS, Pushchino, Russia; 2 pS

NCBI tax ID(s): 56811 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.

General

@ref: 18907

BacDive-ID: 23130

DSM-Number: 16092

keywords: 16S sequence, Bacteria, psychrophilic

description: Psychrobacter muriicola 2 pS is a psychrophilic bacterium that was isolated from water brine within perma-frost soil.

NCBI tax id

NCBI tax id: 56811
Matching level: species

strain history

@ref: 18907
history: <- V. Shcherbakova, Inst. Biochem. Physiol. Microorg., RAS, Pushchino, Russia; 2 pS

doi: 10.13145/bacdive23130.20230509.8.1

Name and taxonomic classification

LPSN

@ref: 20215
description: domain/bacteria
keyword: phylum/pseudomonadota
domain: Bacteria
phylum: Pseudomonadota
class: Gammaproteobacteria
order: Pseudomonadales
family: Moraxellaceae
genus: Psychrobacter
species: Psychrobacter muriicola
full scientific name: Psychrobacter muriicola Shcherbakova et al. 2009

@ref: 18907

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Pseudomonadales

family: Moraxellaceae

genus: Psychrobacter

species: Psychrobacter sp.

full scientific name: Psychrobacter sp.

strain designation: 2 pS

type strain: no

Culture and growth conditions

culture medium

@ref: 18907
name: PM MEDIUM (DSMZ Medium 1152)
growth: yes
link: https://mediadive.dsmz.de/medium/1152
composition: Name: PM MEDIUM (DSMZ Medium 1152) Composition: Agar 20.0 g/l Na2HPO4 11.2 g/l Na acetate 10.0 g/l KH2PO4 4.0 g/l NaCl 4.0 g/l NH4Cl 2.0 g/l MgCl2 x 6 H2O 0.1 g/l MgSO4 x 7 H2O 0.1 g/l HCl 0.025 g/l FeCl2 x 4 H2O 0.015 g/l CaCl2 0.01 g/l CoCl2 x 6 H2O 0.0019 g/l MnCl2 x 4 H2O 0.001 g/l ZnCl2 0.0007 g/l Na2MoO4 x 2 H2O 0.00036 g/l NiCl2 x 6 H2O 0.00024 g/l H3BO3 6e-05 g/l CuCl2 x 2 H2O 2e-05 g/l FeSO4 x 7 H2O Distilled water

culture temp

@ref: 18907
growth: positive
type: growth
temperature: 20
range: psychrophilic

Isolation, sampling and environmental information

isolation

@ref: 18907
sample type: water brine within perma-frost soil
geographic location: Northern Eurasia, Koluma lowland
country: Russia
origin.country: RUS
continent: Asia

isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic
#Environmental	#Terrestrial	#Permafrost
#Condition	#Saline

taxonmaps

@ref: 69479
File name: preview.99_3600.png
url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_80;96_193;97_209;98_234;99_3600&stattab=map
Last taxonomy: Psychrobacter
16S sequence: AF517755
Sequence Identity:
Total samples: 6652
soil counts: 484
aquatic counts: 3933
animal counts: 2136
plant counts: 99

Sequence information

16S sequences

@ref: 18907
description: Psychrobacter muriicola 2pS 16S ribosomal RNA gene, partial sequence
accession: AF517755
length: 1478
database: ena
NCBI tax ID: 1305842

GC content

@ref: 18907
GC-content: 46.0

External links

@ref: 18907

culture collection no.: DSM 16092, VKM B-2270

straininfo link

@ref: 87365
straininfo: 401874

Reference

@id	authors	catalogue	doi/url	title
18907	Curators of the DSMZ	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 16092)	https://www.dsmz.de/collection/catalogue/details/culture/DSM-16092
20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.		10.1099/ijsem.0.004332	List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.		https://microbeatlas.org/	MicrobeAtlas 1.0 beta
87365	Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.		10.60712/SI-ID401874.1	StrainInfo: A central database for resolving microbial strain identifiers