Strain identifier
BacDive ID: 23021
Type strain: 
Species: Chryseobacterium sp.
Strain Designation: 5516J-09
Strain history: <- B.-Y. Kim, KACC; 5516J-09
NCBI tax ID(s): 1871047 (species)
version 8.1 (current version)
General
@ref: 18801
BacDive-ID: 23021
DSM-Number: 18120
keywords: 16S sequence, Bacteria, mesophilic
description: Chryseobacterium sp. 5516J-09 is a mesophilic bacterium that was isolated from dust.
NCBI tax id
- NCBI tax id: 1871047
- Matching level: species
strain history
- @ref: 18801
- history: <- B.-Y. Kim, KACC; 5516J-09
doi: 10.13145/bacdive23021.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacteroidota
- domain: Bacteria
- phylum: Bacteroidota
- class: Flavobacteriia
- order: Flavobacteriales
- family: Weeksellaceae
- genus: Chryseobacterium
- species: Chryseobacterium sp.
- full scientific name: Chryseobacterium Vandamme et al. 1994
synonyms
@ref synonym 20215 Halpernia 20215 Sejongia 20215 Soonwooa 20215 Kaistella 20215 Planobacterium 20215 Epilithonimonas
@ref: 18801
domain: Bacteria
phylum: Bacteroidetes
class: Flavobacteriia
order: Flavobacteriales
family: Weeksellaceae
genus: Chryseobacterium
species: Chryseobacterium sp.
full scientific name: Chryseobacterium sp.
strain designation: 5516J-09
type strain: no
Culture and growth conditions
culture medium
- @ref: 18801
- name: R2A MEDIUM (DSMZ Medium 830)
- growth: yes
- link: https://mediadive.dsmz.de/medium/830
- composition: Name: R2A MEDIUM (DSMZ Medium 830) Composition: Agar 15.0 g/l Casamino acids 0.5 g/l Starch 0.5 g/l Glucose 0.5 g/l Proteose peptone 0.5 g/l Yeast extract 0.5 g/l K2HPO4 0.3 g/l Na-pyruvate 0.3 g/l MgSO4 x 7 H2O 0.05 g/l Distilled water
culture temp
- @ref: 18801
- growth: positive
- type: growth
- temperature: 28
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 18801
- sample type: dust
- geographic location: Jeju
- country: Republic of Korea
- origin.country: KOR
- continent: Asia
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Engineered | #Waste | #Dust (Ash) |
| #Environmental | #Terrestrial | #Dust |
taxonmaps
- @ref: 69479
- File name: preview.99_6762.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_76;96_1132;97_1328;98_4988;99_6762&stattab=map
- Last taxonomy: Kaistella
- 16S sequence: EU755021
- Sequence Identity:
- Total samples: 1593
- soil counts: 196
- aquatic counts: 491
- animal counts: 807
- plant counts: 99
Sequence information
16S sequences
- @ref: 18801
- description: Sejongia sp. 5516J-09 16S ribosomal RNA gene, partial sequence
- accession: EU755021
- length: 1478
- database: ena
- NCBI tax ID: 540558
External links
@ref: 18801
culture collection no.: DSM 18120, KACC 11421
straininfo link
- @ref: 87261
- straininfo: 397206
Reference
| @id | authors | catalogue | doi/url | title |
|---|---|---|---|---|
| 18801 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 18120) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-18120 | |
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta | |
| 87261 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID397206.1 | StrainInfo: A central database for resolving microbial strain identifiers |