Strain identifier
BacDive ID: 211
Type strain:
Species: Trueperella pyogenes
Strain Designation: 3329
Strain history: <- K.H. Schleifer <- CCM <- W. Kötsche, 3329
NCBI tax ID(s): 1661 (species)
General
@ref: 8942
BacDive-ID: 211
DSM-Number: 20594
keywords: Bacteria, anaerobe, human pathogen
description: Trueperella pyogenes 3329 is an anaerobe human pathogen that was isolated from mammary gland of a cow with pyogenic mastitis.
NCBI tax id
- NCBI tax id: 1661
- Matching level: species
strain history
- @ref: 8942
- history: <- K.H. Schleifer <- CCM <- W. Kötsche, 3329
doi: 10.13145/bacdive211.20240510.9
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Actinomycetales
- family: Actinomycetaceae
- genus: Trueperella
- species: Trueperella pyogenes
- full scientific name: Trueperella pyogenes (Glage 1903) Yassin et al. 2011
synonyms
@ref synonym 20215 Actinomyces pyogenes 20215 Arcanobacterium pyogenes 20215 Corynebacterium pyogenes 20215 Bacillus pyogenes
@ref: 8942
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Actinomycetaceae
genus: Trueperella
species: Trueperella pyogenes
full scientific name: Trueperella pyogenes (Glage 1903) Yassin et al. 2011
strain designation: 3329
type strain: no
Culture and growth conditions
culture medium
- @ref: 8942
- name: PYG MEDIUM (MODIFIED) (DSMZ Medium 104)
- growth: yes
- link: https://mediadive.dsmz.de/medium/104
- composition: Name: PYG MEDIUM (modified) (DSMZ Medium 104) Composition: Yeast extract 10.0 g/l Peptone 5.0 g/l Trypticase peptone 5.0 g/l Beef extract 5.0 g/l Glucose 5.0 g/l L-Cysteine HCl x H2O 0.5 g/l NaHCO3 0.4 g/l NaCl 0.08 g/l K2HPO4 0.04 g/l KH2PO4 0.04 g/l MgSO4 x 7 H2O 0.02 g/l CaCl2 x 2 H2O 0.01 g/l Hemin 0.005 g/l Ethanol 0.0038 g/l Resazurin 0.001 g/l Tween 80 Vitamin K1 NaOH Distilled water
culture temp
- @ref: 8942
- growth: positive
- type: growth
- temperature: 37
Physiology and metabolism
oxygen tolerance
- @ref: 8942
- oxygen tolerance: anaerobe
murein
- @ref: 8942
- murein short key: A11.53
- type: A5alpha L-Lys-L-Ala-L-Lys-D-Glu
metabolite utilization
@ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
---|---|---|---|---|
68380 | 16199 | urea | - | hydrolysis |
68380 | 29016 | arginine | - | hydrolysis |
68380 | 29985 | L-glutamate | - | degradation |
68380 | 17632 | nitrate | - | reduction |
68380 | 27897 | tryptophan | - | energy source |
metabolite production
- @ref: 68380
- Chebi-ID: 35581
- metabolite: indole
- production: no
metabolite tests
- @ref: 68380
- Chebi-ID: 35581
- metabolite: indole
- indole test: -
enzymes
@ref | value | activity | ec |
---|---|---|---|
68380 | serine arylamidase | + | |
68380 | glutamyl-glutamate arylamidase | - | |
68380 | glycin arylamidase | + | |
68380 | alanine arylamidase | + | 3.4.11.2 |
68380 | tyrosine arylamidase | - | |
68380 | phenylalanine arylamidase | - | |
68380 | proline-arylamidase | + | 3.4.11.5 |
68380 | L-arginine arylamidase | + | |
68380 | alkaline phosphatase | - | 3.1.3.1 |
68380 | tryptophan deaminase | - | 4.1.99.1 |
68380 | alpha-fucosidase | - | 3.2.1.51 |
68380 | glutamate decarboxylase | - | 4.1.1.15 |
68380 | beta-glucuronidase | + | 3.2.1.31 |
68380 | alpha-arabinosidase | - | 3.2.1.55 |
68380 | beta-glucosidase | - | 3.2.1.21 |
68380 | alpha-glucosidase | + | 3.2.1.20 |
68380 | beta-Galactosidase 6-phosphate | - | |
68380 | beta-galactosidase | + | 3.2.1.23 |
68380 | alpha-galactosidase | - | 3.2.1.22 |
68380 | arginine dihydrolase | - | 3.5.3.6 |
68380 | urease | - | 3.5.1.5 |
API rID32A
@ref | URE | ADH Arg | alpha GAL | beta GAL | beta GP | alpha GLU | beta GLU | alpha ARA | beta GUR | beta NAG | MNE | RAF | GDC | alpha FUC | NIT | IND | PAL | ArgA | ProA | LGA | PheA | LeuA | PyrA | TyrA | AlaA | GlyA | HisA | GGA | SerA |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
8942 | - | - | - | + | - | + | - | - | + | +/- | + | +/- | - | - | - | - | - | + | + | +/- | - | +/- | +/- | - | + | + | - | - | + |
8942 | - | - | - | + | - | + | - | - | + | +/- | - | - | - | - | - | - | - | + | + | - | - | +/- | +/- | - | + | + | +/- | - | + |
Isolation, sampling and environmental information
isolation
- @ref: 8942
- sample type: mammary gland of a cow with pyogenic mastitis
isolation source categories
Cat1 | Cat2 | Cat3 |
---|---|---|
#Infection | #Disease | |
#Host | #Mammals | #Bovinae (Cow, Cattle) |
#Host Body-Site | #Organ | #Mammary gland |
Safety information
risk assessment
- @ref: 8942
- pathogenicity human: yes
- pathogenicity animal: yes
- biosafety level: 2
- biosafety level comment: Risk group (German classification)
External links
@ref: 8942
culture collection no.: DSM 20594, CCM 5753
straininfo link
- @ref: 69894
- straininfo: 49653
literature
- topic: Phylogeny
- Pubmed-ID: 26494240
- title: Bovine vaginal strain Kocuria kristinae and its characterization.
- authors: Stykova E, Nemcova R, Gancarcikova S, Valocky I, Laukova A
- journal: Folia Microbiol (Praha)
- DOI: 10.1007/s12223-015-0431-x
- year: 2015
- mesh: Animals, Anti-Bacterial Agents/pharmacology, Bacterial Adhesion, Cattle, Female, Gram-Positive Bacterial Infections/*veterinary, Microbial Sensitivity Tests, Micrococcaceae/*classification/drug effects/isolation & purification, Phenotype, Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization, Vagina/*microbiology
- topic2: Phenotype
Reference
@id | authors | catalogue | doi/url | title |
---|---|---|---|---|
8942 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 20594) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-20594 | |
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
68380 | Automatically annotated from API rID32A | |||
69894 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID49653.1 | StrainInfo: A central database for resolving microbial strain identifiers |