Strain identifier
BacDive ID: 18693
Type strain:
Species: Sporocytophaga myxococcoides
Strain Designation: Sp m8
NCBI tax ID(s): 153721 (species)
version 8.1 (current version)
General
@ref: 18281
BacDive-ID: 18693
keywords: Bacteria
description: Sporocytophaga myxococcoides Sp m8 is a bacterium that was isolated from soil from fruit garden.
NCBI tax id
- NCBI tax id: 153721
- Matching level: species
doi: 10.13145/bacdive18693.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacteroidota
- domain: Bacteria
- phylum: Bacteroidota
- class: Cytophagia
- order: Cytophagales
- family: Cytophagaceae
- genus: Sporocytophaga
- species: Sporocytophaga myxococcoides
- full scientific name: Sporocytophaga myxococcoides (Krzemieniewska 1933) Stanier 1940 (Approved Lists 1980)
synonyms
- @ref: 20215
- synonym: Cytophaga myxococcoides
@ref: 18281
domain: Bacteria
phylum: Bacteroidetes, not validated
class: Cytophagia
order: Cytophagales
family: Cytophagacea
genus: Sporocytophaga
species: Sporocytophaga myxococcoides
full scientific name: Sporocytophaga myxococcoides
strain designation: Sp m8
type strain: no
Culture and growth conditions
culture medium
@ref | name | growth | composition |
---|---|---|---|
18281 | CA12 AGAR | no | Ingredients: Stock solution 1 (in 100ml): KNO3 7.5g K2HPO4 7.5g Stock solution 2 (in 100ml): MgSO4 x 7H2O 1.5g Stock solution 3 (in 100ml): CaCl2 0.2g FeCl3 0.15g Basal medium: Agar 1.5% Preparation / Remarks: after autoclaving to: a) 1% (v/v) of the 3 stock solutions b) 1% xylose c) trace elements |
18281 | KAN 7 AGAR | yes | Ingredients: Baker's yeast 0.5% (based on fresh weight) CaCl2 0.1% Agar 1.5% Vitamin B12 0.05 % Preparation / Remarks: pH 7.2 autoclaved Combine with 250 mg/L Kanamycin-sulfate, 250 mg/L Neomycin-sulfate and 250 mg/L Cycloheximide (each sterilized by filtration) |
Physiology and metabolism
antibiotic resistance
@ref | ChEBI | group ID | metabolite | is antibiotic | is resistant | resistance conc. |
---|---|---|---|---|---|---|
18281 | 6104 | 5 | kanamycin | yes | yes | 250 µg/mL |
18281 | 7507 | 5 | neomycin | yes | yes | 250 µg/mL |
18281 | 27641 | 5 | cycloheximide | yes | yes | 250 µg/mL |
Isolation, sampling and environmental information
isolation
- @ref: 18281
- sample type: soil from fruit garden
- sampling date: 1980-08-01
- geographic location: near Poitiers
- country: France
- origin.country: FRA
- continent: Europe
isolation source categories
Cat1 | Cat2 | Cat3 |
---|---|---|
#Engineered | #Agriculture | #Garden |
#Environmental | #Terrestrial | #Soil |
#Host Body-Site | #Plant | #Fruit (Seed) |
External links
@ref: 18281
Reference
@id | authors | title | doi/url | journal | pubmed |
---|---|---|---|---|---|
18281 | Reichenbach, H. | Collection description and documentation of myxobacteria by H. Reichenbach, HZI (formerly GBF); Collection curr. located at the DSMZ | |||
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | ||
66794 | Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg | BRENDA, the ELIXIR core data resource in 2021: new developments and updates | 10.1093/nar/gkaa1025 | Nucleic Acids Res. 49: D498-D508 2020 | 33211880 |