Strain identifier
BacDive ID: 18610
Type strain: 
Species: Nannocystis exedens
Strain Designation: Na e5
NCBI tax ID(s): 54 (species)
version 8.1 (current version)
General
@ref: 18281
BacDive-ID: 18610
keywords: Bacteria
description: Nannocystis exedens Na e5 is a bacterium that builds a fruiting body and was isolated from soil from grain field.
NCBI tax id
- NCBI tax id: 54
- Matching level: species
doi: 10.13145/bacdive18610.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Deltaproteobacteria
- order: Myxococcales
- family: Nannocystaceae
- genus: Nannocystis
- species: Nannocystis exedens
- full scientific name: Nannocystis exedens Reichenbach 1970 (Approved Lists 1980)
@ref: 18281
domain: Bacteria
phylum: Proteobacteria
class: Deltaproteobacteria
order: Myxococcales
family: Nannocystaceae
genus: Nannocystis
species: Nannocystis exedens
full scientific name: Nannocystis exedens
strain designation: Na e5
type strain: no
Morphology
multicellular morphology
- @ref: 18281
- forms multicellular complex: yes
- complex name: fruiting body
Culture and growth conditions
culture medium
| @ref | name | growth | composition |
|---|---|---|---|
| 18281 | CHITIN 3 AGAR | no | Ingredients: Yeast extract (Difco) 0.05% MgSO4 x 7H2O 0.1% Agar 1.2% Preparation / Remarks: pH 7.2 After autoclaving add 10 mL of sterile Chitin suspension (100 g/L Chitin in H2O) to 100 mL of the medium and pour on cy-plates. |
| 18281 | CHITIN 4 AGAR | yes | Ingredients: Yeast extract (Difco) 0.05% MgSO4 x 7H2O 0.1% Agar 1.2% Preparation / Remarks: pH 7.2 After autoclaving add 10 mL of sterile Chitin suspension (100 g/L Chitin in H2O) to 100 mL of the medium and pour on w-agar plates. |
| 18281 | COLE AGAR | yes | Ingredients: CaCl2 x 2 H2O 1.3g Agar (Difco) 15.0g Distilled water 1000.0ml Preparation / Remarks: pH 7.2 (KOH) autoclaved Pour the plates and streak living E.coli cells |
| 18281 | SKIM MILK 1 AGAR | no | Ingredients: cy-Agar 300 ml Skim milk (Oxoid) 15g H2O 60 ml Preparation / Remarks: 300 ml cy-agar autoclaved. Separately 15 g skim milk (Oxoid) in 60 ml water and exactly 15 min autoclaving at 115 °C. Mix the two and pour a thin layer on cy-plates. |
| 18281 | TOLI AGAR | yes | Ingredients: CaCl2 x 2 H2O1.3g Agar (Difco)15.0g Distilled water1000.0ml Preparation / Remarks: pH 7.2 (KOH) autoclaved Pour the plates and streak autoclaved E.coli cells |
| 18281 | VY/2 AGAR | yes | Ingredients: Baker's yeast 0.5% (based on fresh weight) CaCl2 0.1% Agar 1.5% Vitamin B12 0.05 % Preparation / Remarks: pH 7.2 autoclaved |
| 18281 | XYLAN 1 AGAR | no | Ingredients: Xylan 0.5% (NH4)2SO4 0.1% Agar 1% Preparation / Remarks: pH 7.2 Xylan (Serva pure molecular weight 25000) Pour after autoclaving as a thin layer on standard 6-agar |
Physiology and metabolism
observation
| @ref | observation |
|---|---|
| 18281 | Strong ability to Yeast lysis |
| 18281 | No ability for chitin degradation |
| 18281 | No ability for Yeast lysis |
| 18281 | Ability for Yeast lysis |
| 18281 | Ability for E. coli lysis |
Isolation, sampling and environmental information
isolation
- @ref: 18281
- sample type: soil from grain field
- sampling date: 1968-05-01
- geographic location: Nebraska
- country: USA
- origin.country: USA
- continent: North America
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Engineered | #Agriculture | #Field |
| #Environmental | #Terrestrial | #Soil |
| #Host | #Plants | #Herbaceous plants (Grass,Crops) |
External links
@ref: 18281
Reference
| @id | authors | title | doi/url | journal | pubmed |
|---|---|---|---|---|---|
| 18281 | Reichenbach, H. | Collection description and documentation of myxobacteria by H. Reichenbach, HZI (formerly GBF); Collection curr. located at the DSMZ | |||
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | ||
| 66794 | Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg | BRENDA, the ELIXIR core data resource in 2021: new developments and updates | 10.1093/nar/gkaa1025 | Nucleic Acids Res. 49: D498-D508 2020 | 33211880 |