Strain identifier
BacDive ID: 18180
Type strain: 
Species: Herpetosiphon sp.
Strain Designation: Hp g12
NCBI tax ID(s): 71864 (species)
version 8.1 (current version)
General
@ref: 18281
BacDive-ID: 18180
keywords: Bacteria
description: Herpetosiphon sp. Hp g12 is a bacterium that was isolated from slimy mat of Chara sp. out of Birch Lake.
NCBI tax id
- NCBI tax id: 71864
- Matching level: species
doi: 10.13145/bacdive18180.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/chloroflexota
- domain: Bacteria
- phylum: Chloroflexota
- class: Chloroflexia
- order: Herpetosiphonales
- family: Herpetosiphonaceae
- genus: Herpetosiphon
- species: Herpetosiphon sp.
- full scientific name: Herpetosiphon Holt and Lewin 1968 (Approved Lists 1980)
@ref: 18281
domain: Bacteria
phylum: Chloroflexi
class: Chloroflexi, not validated
order: Herpetosiphonales
family: Herpetosiphonaceae, not validated
genus: Herpetosiphon
species: Herpetosiphon sp.
full scientific name: Herpetosiphon sp.
strain designation: Hp g12
type strain: no
Morphology
multimedia
- @ref: 18281
- multimedia content: /dsmz_profile/Pictures_DSMZ_Web/Herpetosiphon_giganteus/Hp_g12
- caption: Hp g12
- intellectual property rights: Helmholtz-Zentrum für Infektionsforschung GmbH
Culture and growth conditions
culture medium
| @ref | name | growth | composition |
|---|---|---|---|
| 18281 | CHITIN 7 AGAR | yes | Covering agar (thin layer): MgSO4 x 7H2O 0.1% K2HPO4 0.02% Agar 1.5% Preparation / Remarks: pH 7.2 After autoclaving add 30 mL of sterile Chitin suspension (22.5 g/L Chitin in H2O) to 100 mL of the medium and pour on w-agar plates |
| 18281 | CY-AGAR | yes | Ingredients: Casitone(Difco) 0.3% yeast extract 0.1% CaCl2 0.1% Agar 1.5% Preparation / Remarks: pH 7.2 (KOH) autoclaved |
| 18281 | KAN 5 AGAR | yes | Ingredients: Baker's yeast 0.5% (based on fresh weight) CaCl2 0.1% Agar 1.5% Vitamine B12 0.5 µg/ml Preparation / Remarks: pH 7.2 autoclaved Combine with 250 mg/L Kanamycin-sulfate (sterilized by filtration) |
| 18281 | KAN 7 AGAR | no | Ingredients: Baker's yeast 0.5% (based on fresh weight) CaCl2 0.1% Agar 1.5% Vitamin B12 0.05 % Preparation / Remarks: pH 7.2 autoclaved Combine with 250 mg/L Kanamycin-sulfate, 250 mg/L Neomycin-sulfate and 250 mg/L Cycloheximide (each sterilized by filtration) |
| 18281 | Myx MEDIUM | yes | Ingredients: Peptone (Difco) 1% Glucose 1% Yeast extract (Difco) 0.1% Phosphate buffer 0.01 M pH 6.5 Aerobacter aerogenes (sterilized with formalin) 500 mg/L (dry weight) as described by Kerr, N.S. (1963) The Growth of Myxamoebae of the True Slime Mould, Didymium nigripes, in Axenic Culture. J Gen Microbiol 32: 409-416. |
| 18281 | STAN 21 AGAR with Filter | yes | Ingredients: 1. Agar 1% K2HPO4 0.1% Yeast extract (Difco) 0.002% 2. (NH4)2SO4 0.1% MgSO4 x 7H2O 0.1% CaCl2 x 2H2O 0.1% MnSO4 x H2O 0.01% FeCl3 x 6H2O 0.02% MnSO4 x 7H2O 0.01% FeCl3 0.02% Traceelement-solution 1ml to 100 ml Preparation / Remarks: 1. in 2/3 of the volume after autoclaving 1 + 2 together and pour plates. Hang up a sterile-filter paper |
Physiology and metabolism
observation
| @ref | observation |
|---|---|
| 18281 | Ability for chitin degradation |
| 18281 | Ability for Yeast lysis |
antibiotic resistance
- @ref: 18281
- ChEBI: 6104
- metabolite: kanamycin
- is antibiotic: yes
- is resistant: yes
- resistance conc.: 250 µg/mL
Isolation, sampling and environmental information
isolation
- @ref: 18281
- sample type: slimy mat of Chara sp. out of Birch Lake
- host species: Chara
- geographic location: Minnesota
- country: USA
- origin.country: USA
- continent: North America
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Environmental | #Aquatic | #Lake (large) |
| #Host | #Algae | #Green algae |
External links
@ref: 18281
Reference
| @id | authors | title | doi/url |
|---|---|---|---|
| 18281 | Reichenbach, H. | Collection description and documentation of myxobacteria by H. Reichenbach, HZI (formerly GBF); Collection curr. located at the DSMZ | |
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |