Strain identifier

BacDive ID: 18074

Type strain: Yes

Species: Blautia luti

Strain Designation: BInIX

Strain history: DSM 14534 <-- D. Taras <-- G. Le Blay.

NCBI tax ID(s): 649762 (strain), 89014 (species)

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General

@ref: 5286

BacDive-ID: 18074

DSM-Number: 14534

keywords: genome sequence, 16S sequence, Bacteria, anaerobe, mesophilic

description: Blautia luti BInIX is an anaerobe, mesophilic bacterium that was isolated from Human feces.

NCBI tax id

NCBI tax idMatching level
649762strain
89014species

strain history

@refhistory
5286<- D.Taras <- G. Le Blay, BInIX
67770DSM 14534 <-- D. Taras <-- G. Le Blay.

doi: 10.13145/bacdive18074.20250331.9.3

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Clostridia
  • order: Eubacteriales
  • family: Lachnospiraceae
  • genus: Blautia
  • species: Blautia luti
  • full scientific name: Blautia luti (Simmering et al. 2002) Liu et al. 2008

  • synonyms

    • @ref: 20215
    • synonym: Ruminococcus luti

@ref: 5286

domain: Bacteria

phylum: Firmicutes

class: Clostridia

order: Clostridiales

family: Lachnospiraceae

genus: Blautia

species: Blautia luti

full scientific name: Blautia luti (Simmering et al. 2002) Liu et al. 2008

strain designation: BInIX

type strain: yes

Culture and growth conditions

culture medium

  • @ref: 5286
  • name: PYG MEDIUM (MODIFIED) (DSMZ Medium 104)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/104
  • composition: Name: PYG MEDIUM (modified) (DSMZ Medium 104) Composition: Yeast extract 10.0 g/l Peptone 5.0 g/l Trypticase peptone 5.0 g/l Beef extract 5.0 g/l Glucose 5.0 g/l L-Cysteine HCl x H2O 0.5 g/l NaHCO3 0.4 g/l NaCl 0.08 g/l K2HPO4 0.04 g/l KH2PO4 0.04 g/l MgSO4 x 7 H2O 0.02 g/l CaCl2 x 2 H2O 0.01 g/l Hemin 0.005 g/l Ethanol 0.0038 g/l Resazurin 0.001 g/l Tween 80 Vitamin K1 NaOH Distilled water

culture temp

@refgrowthtypetemperature
5286positivegrowth37
67770positivegrowth37

Physiology and metabolism

oxygen tolerance

@refoxygen toleranceconfidence
5286anaerobe
56852anaerobe
125439anaerobe98.5

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6838027897tryptophan-energy source
6838029985L-glutamate-degradation
6838016199urea+hydrolysis
6838016024D-mannose-fermentation
6838017632nitrate-reduction
6838016634raffinose-fermentation

metabolite production

  • @ref: 68380
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

  • @ref: 68380
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: -

enzymes

@refvalueactivityec
68380pyrrolidonyl arylamidase-3.4.19.3
68380leucyl glycin arylamidase-3.4.11.1
68380alpha-fucosidase+3.2.1.51
68380glutamate decarboxylase-4.1.1.15
68380beta-glucosidase+3.2.1.21
68380alpha-glucosidase+3.2.1.20
68380beta-Galactosidase 6-phosphate-
68380beta-galactosidase+3.2.1.23
68380serine arylamidase-
68380glutamyl-glutamate arylamidase-
68380histidine arylamidase-
68380glycin arylamidase-
68380alanine arylamidase-3.4.11.2
68380tyrosine arylamidase-
68380leucine arylamidase-3.4.11.1
68380phenylalanine arylamidase-
68380proline-arylamidase-3.4.11.5
68380L-arginine arylamidase-
68380alkaline phosphatase-3.1.3.1
68380tryptophan deaminase-4.1.99.1
68380N-acetyl-beta-glucosaminidase-3.2.1.52
68380beta-glucuronidase-3.2.1.31
68380alpha-arabinosidase+3.2.1.55
68380alpha-galactosidase+3.2.1.22
68380urease+3.5.1.5

API rID32A

@refUREADH Argalpha GALbeta GALbeta GPalpha GLUbeta GLUalpha ARAbeta GURbeta NAGMNERAFGDCalpha FUCNITINDPALArgAProALGAPheALeuAPyrATyrAAlaAGlyAHisAGGASerA
5286+-++-+++-----+---------------
5286++++-+++-----+---------------

Isolation, sampling and environmental information

isolation

@refsample typecountryorigin.countrycontinentsampling date
5286Human fecesGermanyDEUEurope
56852Human fecesGermanyDEUEurope1999-02-01
67770Human feces

isolation source categories

Cat1Cat2Cat3
#Host#Human
#Host Body Product#Gastrointestinal tract#Feces (Stool)

Safety information

risk assessment

  • @ref: 5286
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
20218Blautia luti gene for 16S rRNA, partial sequence, strain: DSM 14534AB6915761481nuccore649762
5286Blautia luti 16S rRNA gene, strain bln9AJ1331241335nuccore89014
67770Blautia luti gene for 16S ribosomal RNA, partial sequence, strain: JCM 17040LC0106921492nuccore89014

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Blautia luti DSM 14534649762.4wgspatric649762
67770Blautia luti DSM 14534 = JCM 17040GCA_009707925contigncbi649762

GC content

@refGC-contentmethod
528643.3
6777043.3high performance liquid chromatography (HPLC)

Genome-based predictions

predictions

@refmodeltraitdescriptionpredictionconfidencetraining_data
125438gram-positivegram-positivePositive reaction to Gram-stainingyes76.221no
125438anaerobicanaerobicAbility to grow under anoxygenic conditions (including facultative anaerobes)yes88.318yes
125438spore-formingspore-formingAbility to form endo- or exosporesno55.66no
125438aerobicaerobicAbility to grow under oxygenic conditions (including facultative aerobes)no94.5yes
125438thermophilethermophilicAbility to grow at temperatures above or equal to 45°Cno95.684yes
125438motile2+flagellatedAbility to perform flagellated movementno74.529no
125439BacteriaNetspore_formationAbility to form endo- or exosporesyes65.8
125439BacteriaNetmotilityAbility to perform movementyes76.5
125439BacteriaNetgram_stainReaction to gram-stainingvariable85.2
125439BacteriaNetoxygen_toleranceOxygenic conditions needed for growthanaerobe98.5

External links

@ref: 5286

culture collection no.: DSM 14534, CCUG 45635, JCM 17040, KCTC 5974, CIP 107222#, JCM 14658#, CIP 107222, KCTC 15704

straininfo link

  • @ref: 87062
  • straininfo: 100937

literature

topicPubmed-IDtitleauthorsjournalDOIyearmeshtopic2
Phylogeny12353871Ruminococcus luti sp. nov., isolated from a human faecal sample.Simmering R, Taras D, Schwiertz A, Le Blay G, Gruhl B, Lawson PA, Collins MD, Blaut MSyst Appl Microbiol10.1078/0723-2020-001122002Bacteria/growth & development/isolation & purification/metabolism, Bacteria, Anaerobic/metabolism, Base Sequence, Feces/*microbiology, Genes, Bacterial, Gram-Positive Bacteria/classification/cytology/*isolation & purification, Humans, Molecular Sequence Data, Phylogeny, RNA, Ribosomal, 16S/analysis, Sequence AlignmentEnzymology
Pathogenicity30451443Exopolysaccharides Produced by Lactobacillus rhamnosus KL 53A and Lactobacillus casei Fyos Affect Their Adhesion to Enterocytes.Konieczna C, Slodzinski M, Schmidt MTPol J Microbiol10.21307/pjm-2018-0322018*Bacterial Adhesion, Caco-2 Cells, Enterocytes/*microbiology, Faecalibacterium/enzymology, Gastrointestinal Microbiome, Humans, Hydrolysis, Lactobacillus casei/*chemistry/physiology, Lactobacillus rhamnosus/*chemistry/physiology, Polysaccharides, Bacterial/*metabolism, ProbioticsEnzymology
Genetics32381603Draft Genome Sequence of Blautia luti DSM 14534(T), Isolated from Human Stool.Ortiz RL, Melis-Arcos F, Covarrubias PC, Ugalde JA, Apte ZS, Perez-Donoso J, Cardenas JP, Almonacid DEMicrobiol Resour Announc10.1128/MRA.00088-202020Phylogeny

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
5286Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 14534)https://www.dsmz.de/collection/catalogue/details/culture/DSM-14534
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
56852Curators of the CCUGCulture Collection University of Gothenburg (CCUG) (CCUG 45635)https://www.ccug.se/strain?id=45635
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
68380Automatically annotated from API rID32A
87062Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID100937.1StrainInfo: A central database for resolving microbial strain identifiers
125438Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann10.1101/2024.08.12.607695Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets
125439Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardyhttps://github.com/GenomeNet/deepGdeepG: Deep Learning for Genome Sequence Data. R package version 0.3.1