Strain identifier

BacDive ID: 17901

Type strain: Yes

Species: Methylohalomonas lacus

Culture col. no.: DSM 15733, NCCB 100208, UNIQEM U237, HMT 1

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 6090

BacDive-ID: 17901

DSM-Number: 15733

keywords: gram-negative, mesophilic, aerobe, Bacteria, 16S sequence, rod-shaped

description: Methylohalomonas lacus DSM 15733 is an aerobe, mesophilic, gram-negative bacterium that was isolated from hypersaline inland lakes in south-western Siberia.

strain history: <- D. Y. Sorokin, Winogradski Inst. Microbiol., RAS, Moscow, Russia; HMT 1

doi: 10.13145/bacdive17901.20201210.5

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/proteobacteria
  • domain: Bacteria
  • phylum: Proteobacteria
  • class: Gammaproteobacteria
  • order: Chromatiales
  • family: Ectothiorhodospiraceae
  • genus: Methylohalomonas
  • species: Methylohalomonas lacus
  • full scientific name: Methylohalomonas lacus Sorokin et al. 2007

@ref: 6090

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Oceanospirillales

family: Ectothiorhodospiraceae

genus: Methylohalomonas

species: Methylohalomonas lacus

full scientific name: Methylohalomonas lacus Sorokin et al. 2007

type strain: yes

Morphology

cell morphology

  • @ref: 32094
  • gram stain: negative
  • cell length: 2 µm
  • cell width: 0.55 µm
  • cell shape: rod-shaped
  • motility: no

Culture and growth conditions

culture medium

  • @ref: 6090
  • name: METHYLOHALOMONAS MEDIUM (DSMZ Medium 1171)
  • growth: yes
  • link: https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium1171.pdf

culture temp

  • @ref: 6090
  • growth: positive
  • type: growth
  • temperature: 28
  • range: mesophilic

culture pH

@refabilitytypepH
32094positivegrowth6.5-8.2
32094positiveoptimum7.5

Physiology and metabolism

oxygen tolerance

  • @ref: 32094
  • oxygen tolerance: aerobe

halophily

@refsaltgrowthtested relationconcentration
32094NaClpositivegrowth2.9-23.2 %
32094NaClpositiveoptimum11.6 %

observation

  • @ref: 32094
  • observation: aggregates in chains

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
3209416236ethanol+carbon source
3209415740formate+carbon source
3209417822serine+carbon source

Isolation, sampling and environmental information

isolation

  • @ref: 6090
  • sample type: hypersaline inland lakes in south-western Siberia
  • geographic location: Altai
  • country: Russia
  • origin.country: RUS
  • continent: Asia

isolation source categories

Cat1Cat2Cat3
#Environmental#Aquatic#Lake (large)
#Condition#Saline

Safety information

risk assessment

  • @ref: 6090
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 6090
  • description: Methylohalomonas lacus strain HMT 1 16S ribosomal RNA gene, partial sequence
  • accession: DQ834966
  • length: 1325
  • database: ena
  • NCBI tax ID: 398773

GC content

  • @ref: 6090
  • GC-content: 59.6

External links

@ref: 6090

culture collection no.: DSM 15733, NCCB 100208, UNIQEM U237, HMT 1

straininfo link

@refpassport
20218http://www.straininfo.net/strains/764427
20218http://www.straininfo.net/strains/764428
20218http://www.straininfo.net/strains/764429

Reference

@idauthorscataloguedoi/urltitlejournalpubmedID_cross_reference
6090Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 15733)https://www.dsmz.de/collection/catalogue/details/culture/DSM-15733
20215D.Gleim, M.Kracht, N.Weiss et. al.http://www.dsmz.de/bacterial-diversity/prokaryotic-nomenclature-up-to-date.htmlProkaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
2834010.1099/ijs.0.64955-0
32094Barberan A, Caceres Velazquez H, Jones S, Fierer N.10.1128/mSphere.00237-17Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information28340