General

@ref: 5540

BacDive-ID: 17845

DSM-Number: 14786

keywords: 16S sequence, Bacteria, mesophilic

description: Thioalkalispira microaerophila DSM 14786 is a mesophilic bacterium that was isolated from soda lake Fazdah.

NCBI tax id

• NCBI tax id: 200624
• Matching level: species

strain history

• @ref: 5540
• history: <- D. Y. Sorokin; ALEN1

doi: 10.13145/bacdive17845.20230509.8.1

Name and taxonomic classification

LPSN

• @ref: 20215
• description: domain/bacteria
• keyword: phylum/pseudomonadota
• domain: Bacteria
• phylum: Pseudomonadota
• class: Gammaproteobacteria
• order: Chromatiales
• family: Thioalkalispiraceae
• genus: Thioalkalispira
• species: Thioalkalispira microaerophila
• full scientific name: Thioalkalispira microaerophila Sorokin et al. 2002

@ref: 5540

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Chromatiales

family: Thioalkalispiraceae

genus: Thioalkalispira

species: Thioalkalispira microaerophila

full scientific name: Thioalkalispira microaerophila Sorokin et al. 2002

type strain: yes

Culture and growth conditions

culture medium

• @ref: 5540
• name: ALKALIPHILIC SULPHUR RESPIRING STRAINS MEDIUM (DSMZ Medium 925)
• growth: yes
• link: https://mediadive.dsmz.de/medium/925
• composition: Name: ALKALIPHILIC SULPHUR RESPIRING STRAINS MEDIUM (DSMZ Medium 925) Composition: Na2CO3 20.0 g/l NaHCO3 10.0 g/l NaCl 5.0 g/l K2HPO4 1.0 g/l MgCl2 x 6 H2O 0.2 g/l H3BO3 0.0006 g/l CoCl2 x 6 H2O 0.0004 g/l ZnSO4 x 7 H2O 0.0002 g/l Na2MoO4 x 2 H2O 6e-05 g/l MnCl2 x 4 H2O 6e-05 g/l NiCl2 x 6 H2O 4e-05 g/l CuCl2 x 2 H2O 2e-05 g/l EDTA 1e-05 g/l FeSO4 x 7 H2O 4e-06 g/l Distilled water

culture temp

• @ref: 5540
• growth: positive
• type: growth
• temperature: 28
• range: mesophilic

Isolation, sampling and environmental information

isolation

• @ref: 5540
• sample type: soda lake Fazdah
• country: Egypt
• origin.country: EGY
• continent: Africa

isolation source categories

Safety information

risk assessment

• @ref: 5540
• biosafety level: 1
• biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

• @ref: 5540
• description: Thioalkalispira microaerophila strain ALEN 1 16S ribosomal RNA gene, partial sequence
• accession: AF481118
• length: 1433
• database: ena
• NCBI tax ID: 200624

GC content

• @ref: 5540
• GC-content: 59

External links

@ref: 5540

culture collection no.: DSM 14786, UNIQEM 212, ALEN 1

straininfo link

• @ref: 86836
• straininfo: 100500

literature

• topic: Phylogeny
• Pubmed-ID: 12508886
• title: Thioalkalispira microaerophila gen. nov., sp. nov., a novel lithoautotrophic, sulfur-oxidizing bacterium from a soda lake.
• authors: Sorokin DY, Tourova TP, Kolganova TV, Sjollema KA, Kuenen JG
• journal: Int J Syst Evol Microbiol
• DOI: 10.1099/00207713-52-6-2175
• year: 2002
• mesh: Base Sequence, Cytochromes/metabolism, DNA, Bacterial/genetics, DNA, Ribosomal/genetics, Fresh Water/microbiology, Gammaproteobacteria/*classification/genetics/isolation & purification/metabolism, Microscopy, Electron, Molecular Sequence Data, Oxidation-Reduction, Phenotype, Phylogeny, RNA, Bacterial/genetics, RNA, Ribosomal, 16S/genetics, Sulfur/metabolism, Terminology as Topic
• topic2: Metabolism

Reference