Strain identifier

BacDive ID: 17828

Type strain: Yes

Species: Sutterella stercoricanis

Strain history: CCUG 47620 <-- P. A. Lawson; Univ. of Reading, UK; 5BAC4 <-- H. L. Greetham.

NCBI tax ID(s): 234908 (species)

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General

@ref: 7198

BacDive-ID: 17828

DSM-Number: 17807

keywords: 16S sequence, Bacteria, anaerobe, mesophilic

description: Sutterella stercoricanis DSM 17807 is an anaerobe, mesophilic bacterium that was isolated from canine faeces .

NCBI tax id

  • NCBI tax id: 234908
  • Matching level: species

strain history

@refhistory
7198<- CCUG <- P. A. Lawson, Reading <- H. L. Greetham
67770CCUG 47620 <-- P. A. Lawson; Univ. of Reading, UK; 5BAC4 <-- H. L. Greetham.

doi: 10.13145/bacdive17828.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Betaproteobacteria
  • order: Burkholderiales
  • family: Sutterellaceae
  • genus: Sutterella
  • species: Sutterella stercoricanis
  • full scientific name: Sutterella stercoricanis Greetham et al. 2004

@ref: 7198

domain: Bacteria

phylum: Proteobacteria

class: Betaproteobacteria

order: Burkholderiales

family: Sutterellaceae

genus: Sutterella

species: Sutterella stercoricanis

full scientific name: Sutterella stercoricanis Greetham et al. 2004

type strain: yes

Morphology

colony morphology

@refincubation period
71981-2 days
577912-3 days

Culture and growth conditions

culture medium

  • @ref: 7198
  • name: BTU MEDIUM (DSMZ Medium 413)
  • growth: yes
  • link: https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium413.pdf

culture temp

@refgrowthtypetemperaturerange
7198positivegrowth37mesophilic
57791positivegrowth37mesophilic
67770positivegrowth37mesophilic

Physiology and metabolism

oxygen tolerance

@refoxygen tolerance
7198anaerobe
57791anaerobe

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837717634D-glucose-builds acid from
6837715824D-fructose-builds acid from
6837717306maltose-builds acid from
6837717992sucrose-builds acid from
6837718257ornithine-degradation
6837716199urea-hydrolysis
6837727897tryptophan-energy source

metabolite production

  • @ref: 68377
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

  • @ref: 68377
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: -

enzymes

@refvalueactivityec
7198catalase-1.11.1.6
7198cytochrome-c oxidase-1.9.3.1
68377tryptophan deaminase-4.1.99.1
68377gamma-glutamyltransferase-2.3.2.2
68377proline-arylamidase-3.4.11.5
68377beta-galactosidase-3.2.1.23
68377alkaline phosphatase-3.1.3.1
68377lipase-
68377urease-3.5.1.5
68377ornithine decarboxylase-4.1.1.17
68377beta-lactamase-3.5.2.6

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    57791C14:04.414
    57791C16:025.816
    57791C18:08.918
    57791C16:1 ω7c615.819
    57791C18:1 ω9c37.517.769
    57791C18:2 ω6,9c/C18:0 ANTE17.517.724
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API NH

@refPENGLUFRUMALSACODCURELIPPALbeta GALProAGGTIND
7198-------------
7198-------------

Isolation, sampling and environmental information

isolation

@refsample typegeographic locationcountryorigin.countrycontinentsampling date
7198canine faeces (male Labrador)ReadingUnited KingdomGBREurope
57791Canine feces,male LabradorWaltham Centre for Pet Nutr.United KingdomGBREurope1998
67770Canine faeces

isolation source categories

Cat1Cat2Cat3
#Host#Mammals#Canidae (Dog)
#Host Body Product#Gastrointestinal tract#Feces (Stool)

taxonmaps

  • @ref: 69479
  • File name: preview.99_55313.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_173;96_2443;97_2977;98_3729;99_55313&stattab=map
  • Last taxonomy: Sutterella
  • 16S sequence: AJ566849
  • Sequence Identity:
  • Total samples: 12691
  • soil counts: 69
  • aquatic counts: 182
  • animal counts: 12421
  • plant counts: 19

Safety information

risk assessment

  • @ref: 7198
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 7198
  • description: Sutterella stercoricanis 16S rRNA gene, type strain CCUG 47620
  • accession: AJ566849
  • length: 1455
  • database: ena
  • NCBI tax ID: 234908

GC content

  • @ref: 67770
  • GC-content: 60
  • method: high performance liquid chromatography (HPLC)

External links

@ref: 7198

culture collection no.: DSM 17807, CCUG 47620, CIP 108024, JCM 32441

straininfo link

  • @ref: 86819
  • straininfo: 132892

literature

topicPubmed-IDtitleauthorsjournalDOIyearmeshtopic2
Phylogeny15388713Sutterella stercoricanis sp. nov., isolated from canine faeces.Greetham HL, Collins MD, Gibson GR, Giffard C, Falsen E, Lawson PAInt J Syst Evol Microbiol10.1099/ijs.0.63098-02004Alcaligenaceae/*classification/cytology/*isolation & purification/physiology, Animals, Bile, DNA, Bacterial/chemistry/isolation & purification, DNA, Ribosomal/chemistry/isolation & purification, Dogs, Feces/*microbiology, Genes, rRNA, Molecular Sequence Data, Oxidoreductases/analysis, Phylogeny, RNA, Bacterial/genetics, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Urease/analysisEnzymology
Phylogeny30394865Mesosutterella multiformis gen. nov., sp. nov., a member of the family Sutterellaceae and Sutterella megalosphaeroides sp. nov., isolated from human faeces.Sakamoto M, Ikeyama N, Kunihiro T, Iino T, Yuki M, Ohkuma MInt J Syst Evol Microbiol10.1099/ijsem.0.0030962018Alcaligenaceae/classification, Bacterial Typing Techniques, Base Composition, Burkholderiales/*classification/genetics/isolation & purification, DNA, Bacterial/genetics, Fatty Acids/chemistry, Feces/*microbiology, Female, Humans, Japan, Male, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Vitamin K 2/analogs & derivatives/chemistryPathogenicity

Reference

@idauthorscataloguedoi/urltitle
7198Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 17807)https://www.dsmz.de/collection/catalogue/details/culture/DSM-17807
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
57791Curators of the CCUGCulture Collection University of Gothenburg (CCUG) (CCUG 47620)https://www.ccug.se/strain?id=47620
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
68377Automatically annotated from API NH
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.https://microbeatlas.org/MicrobeAtlas 1.0 beta
86819Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID132892.1StrainInfo: A central database for resolving microbial strain identifiers