Strain identifier
BacDive ID: 1764
Type strain: 
Species: Scardovia inopinata
Strain Designation: B3067
Strain history: <- B. Biavati <- F. Crociani, B3067
NCBI tax ID(s): 78259 (species)
General
@ref: 3801
BacDive-ID: 1764
DSM-Number: 10108
keywords: Bacteria, anaerobe, mesophilic, human pathogen
description: Scardovia inopinata B3067 is an anaerobe, mesophilic human pathogen that was isolated from human dental caries.
NCBI tax id
- NCBI tax id: 78259
- Matching level: species
strain history
- @ref: 3801
- history: <- B. Biavati <- F. Crociani, B3067
doi: 10.13145/bacdive1764.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Bifidobacteriales
- family: Bifidobacteriaceae
- genus: Scardovia
- species: Scardovia inopinata
- full scientific name: Scardovia inopinata (Crociani et al. 1996) Jian and Dong 2002
synonyms
- @ref: 20215
- synonym: Bifidobacterium inopinatum
@ref: 3801
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Bifidobacteriales
family: Bifidobacteriaceae
genus: Scardovia
species: Scardovia inopinata
full scientific name: Scardovia inopinata (Crociani et al. 1996) Jian and Dong 2002 emend. Downes et al. 2011 emend. Nouioui et al. 2018
strain designation: B3067
type strain: no
Culture and growth conditions
culture medium
- @ref: 3801
- name: BIFIDOBACTERIUM MEDIUM (DSMZ Medium 58)
- growth: yes
- link: https://mediadive.dsmz.de/medium/58
- composition: Name: BIFIDOBACTERIUM MEDIUM (DSMZ Medium 58) Composition: Glucose 10.0 g/l Casein peptone 10.0 g/l Bacto Soytone 5.0 g/l Meat extract 5.0 g/l Yeast extract 5.0 g/l L-Cysteine HCl x H2O 0.5 g/l NaHCO3 0.4 g/l NaCl 0.08 g/l MnSO4 x H2O 0.05 g/l KH2PO4 0.04 g/l K2HPO4 0.04 g/l MgSO4 x 7 H2O 0.02 g/l CaCl2 x 2 H2O 0.01 g/l Tween 80 Resazurin Distilled water
culture temp
- @ref: 3801
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Physiology and metabolism
oxygen tolerance
- @ref: 3801
- oxygen tolerance: anaerobe
Isolation, sampling and environmental information
isolation
- @ref: 3801
- sample type: human dental caries
- geographic location: Bologna
- country: Italy
- origin.country: ITA
- continent: Europe
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Host | #Human | |
| #Host Body-Site | #Oral cavity and airways | #Tooth |
| #Host Body-Site | #Other | #Wound |
Safety information
risk assessment
- @ref: 3801
- pathogenicity human: yes, in single cases
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
GC content
- @ref: 3801
- GC-content: 45
- method: thermal denaturation, midpoint method (Tm)
External links
@ref: 3801
culture collection no.: DSM 10108
straininfo link
- @ref: 71411
- straininfo: 48749
Reference
| @id | authors | catalogue | doi/url | title |
|---|---|---|---|---|
| 3801 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 10108) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-10108 | |
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
| 71411 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID48749.1 | StrainInfo: A central database for resolving microbial strain identifiers |