Strain identifier

BacDive ID: 17359

Type strain: Yes

Species: Vibrio stylophorae

Strain Designation: KTW-12

Strain history: <- LMG <- W.-M. Chen, National Kaohsiung Marine University, Taiwan

NCBI tax ID(s): 659351 (species)

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General

@ref: 18132

BacDive-ID: 17359

DSM-Number: 25940

keywords: 16S sequence, Bacteria, mesophilic

description: Vibrio stylophorae KTW-12 is a mesophilic bacterium that was isolated from reef-building coral.

NCBI tax id

  • NCBI tax id: 659351
  • Matching level: species

strain history

  • @ref: 18132
  • history: <- LMG <- W.-M. Chen, National Kaohsiung Marine University, Taiwan

doi: 10.13145/bacdive17359.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Vibrionales
  • family: Vibrionaceae
  • genus: Vibrio
  • species: Vibrio stylophorae
  • full scientific name: Vibrio stylophorae Sheu et al. 2011

@ref: 18132

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Vibrionales, not validated

family: Vibrionaceae

genus: Vibrio

species: Vibrio stylophorae

full scientific name: Vibrio stylophorae Sheu et al. 2011

strain designation: KTW-12

type strain: yes

Culture and growth conditions

culture medium

  • @ref: 18132
  • name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/514
  • composition: Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water

culture temp

  • @ref: 18132
  • growth: positive
  • type: growth
  • temperature: 28
  • range: mesophilic

Isolation, sampling and environmental information

isolation

  • @ref: 18132
  • sample type: reef-building coral
  • geographic location: Taiwan, Kenting
  • country: China
  • origin.country: CHN
  • continent: Asia

isolation source categories

  • Cat1: #Host
  • Cat2: #Invertebrates (Other)
  • Cat3: #Cnidaria (Corals)

taxonmaps

  • @ref: 69479
  • File name: preview.99_144748.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_14;96_20881;97_71520;98_96026;99_144748&stattab=map
  • Last taxonomy: Vibrio stylophorae subclade
  • 16S sequence: GQ281380
  • Sequence Identity:
  • Total samples: 2504
  • soil counts: 49
  • aquatic counts: 1714
  • animal counts: 732
  • plant counts: 9

Safety information

risk assessment

  • @ref: 18132
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 20218
  • description: Vibrio stylophorae strain KTW-12 16S ribosomal RNA gene, partial sequence
  • accession: GQ281380
  • length: 1467
  • database: ena
  • NCBI tax ID: 659351

External links

@ref: 18132

culture collection no.: DSM 25940, BCRC 8010, LMG 25357

straininfo link

  • @ref: 86360
  • straininfo: 363693

literature

  • topic: Phylogeny
  • Pubmed-ID: 20935089
  • title: Vibrio stylophorae sp. nov., isolated from the reef-building coral Stylophora pistillata.
  • authors: Sheu SY, Jiang SR, Chen CA, Wang JT, Chen WM
  • journal: Int J Syst Evol Microbiol
  • DOI: 10.1099/ijs.0.026666-0
  • year: 2010
  • mesh: Animals, Anthozoa/*microbiology, Bacterial Proteins/genetics, Bacterial Typing Techniques, Base Composition, Cluster Analysis, DNA, Bacterial/chemistry/genetics, DNA, Ribosomal/chemistry/genetics, Fatty Acids/analysis, Hydrogen-Ion Concentration, Molecular Sequence Data, Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Sodium Chloride/metabolism, Taiwan, Temperature, Vibrio/*classification/genetics/*isolation & purification/physiology
  • topic2: Genetics

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
18132Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 25940)https://www.dsmz.de/collection/catalogue/details/culture/DSM-25940
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.https://microbeatlas.org/MicrobeAtlas 1.0 beta
86360Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID363693.1StrainInfo: A central database for resolving microbial strain identifiers