Strain identifier

BacDive ID: 17271

Type strain: No

Species: Vibrio parahaemolyticus

Strain history: <- NCCP, National Culture Collection of Pathogens, Korea <- Korea Natl. Inst. Health (KNIH), Seoul

NCBI tax ID(s): 670 (species)

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General

@ref: 18097

BacDive-ID: 17271

DSM-Number: 25722

keywords: Bacteria

description: Vibrio parahaemolyticus DSM 25722 is a bacterium that was isolated from human stool.

NCBI tax id

  • NCBI tax id: 670
  • Matching level: species

strain history

  • @ref: 18097
  • history: <- NCCP, National Culture Collection of Pathogens, Korea <- Korea Natl. Inst. Health (KNIH), Seoul

doi: 10.13145/bacdive17271.20240510.9

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Vibrionales
  • family: Vibrionaceae
  • genus: Vibrio
  • species: Vibrio parahaemolyticus
  • full scientific name: Vibrio parahaemolyticus (Fujino et al. 1951) Sakazaki et al. 1963 (Approved Lists 1980)

  • synonyms

    @refsynonym
    20215Pasteurella parahaemolytica
    20215Beneckea parahaemolytica

@ref: 18097

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Vibrionales, not validated

family: Vibrionaceae

genus: Vibrio

species: Vibrio parahaemolyticus

full scientific name: Vibrio parahaemolyticus (Fujino et al. 1951) Sakazaki et al. 1963 emend. West et al. 1986

type strain: no

Morphology

multimedia

  • @ref: 18097
  • multimedia content: https://www.dsmz.de/microorganisms/photos/DSM_25722.jpg
  • intellectual property rights: © Leibniz-Institut DSMZ

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
18097TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)yeshttps://mediadive.dsmz.de/medium/535Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water
18097VIBRIO NATRIEGENS MEDIUM (DSMZ Medium 115)yeshttps://mediadive.dsmz.de/medium/115Name: VIBRIO NATRIEGENS MEDIUM (DSMZ Medium 115) Composition: NaCl 15.0 g/l Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water

culture temp

@refgrowthtypetemperature
18097positivegrowth30
18097positivegrowth28

Physiology and metabolism

antibiogram

  • @ref: 18097
  • medium: Mueller-Hinton Agar
  • incubation temperature: 30
  • incubation time: 1
  • oxygen condition: aerob
  • Penicillin G: 6
  • oxacillin: 0
  • ampicillin: 10
  • ticarcillin: 14
  • mezlocillin: 22
  • cefalotin: 24
  • cefazolin: 24
  • cefotaxime: 42
  • aztreonam: 30
  • imipenem: 40-42
  • tetracycline: 34
  • chloramphenicol: 38
  • gentamycin: 22
  • amikacin: 22
  • vancomycin: 14
  • erythromycin: 22
  • lincomycin: 10
  • ofloxacin: 30
  • norfloxacin: 36
  • colistin: 10
  • pipemidic acid: 26
  • nitrofurantoin: 28
  • bacitracin: 0
  • polymyxin b: 12
  • kanamycin: 20
  • neomycin: 20
  • doxycycline: 30-32
  • ceftriaxone: 42
  • clindamycin: 18-20
  • fosfomycin: 26
  • moxifloxacin: 28-30
  • linezolid: 30
  • nystatin: 0
  • quinupristin/dalfopristin: 0
  • teicoplanin: 10-12
  • piperacillin/tazobactam: 32

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6836830849L-arabinose-fermentation
6836827613amygdalin-fermentation
6836828053melibiose-fermentation
6836817992sucrose-fermentation
6836862345L-rhamnose-fermentation
6836830911sorbitol-fermentation
6836817268myo-inositol-fermentation
6836816899D-mannitol-fermentation
6836817634D-glucose-fermentation
6836827897tryptophan-energy source
6836816199urea-hydrolysis
6836816947citrate-assimilation
6836818257ornithine+degradation
6836825094lysine+degradation
6836829016arginine-hydrolysis

metabolite production

@refChebi-IDmetaboliteproduction
6836815688acetoinno
6836835581indoleno
6836816136hydrogen sulfideno

metabolite tests

@refChebi-IDmetabolitevoges-proskauer-testindole test
6836815688acetoin-
6836835581indole-

enzymes

@refvalueactivityec
68368cytochrome oxidase+1.9.3.1
68368tryptophan deaminase-4.1.99.1
68368urease-3.5.1.5
68368ornithine decarboxylase+4.1.1.17
68368lysine decarboxylase+4.1.1.18
68368arginine dihydrolase-3.5.3.6
68368beta-galactosidase-3.2.1.23

API 20E

@refONPGADH ArgLDC LysODCCITH2SURETDA TrpINDVPGELGLUMANINOSorRHASACMELAMYARAOX
18097--++------+/----------+
18097--++------+/----------+

Isolation, sampling and environmental information

isolation

  • @ref: 18097
  • sample type: human stool
  • geographic location: Incheon
  • country: Republic of Korea
  • origin.country: KOR
  • continent: Asia

isolation source categories

Cat1Cat2Cat3
#Host Body Product#Gastrointestinal tract#Feces (Stool)
#Host#Human

Safety information

risk assessment

  • @ref: 18097
  • biosafety level: 2
  • biosafety level comment: Risk group (German classification)

External links

@ref: 18097

culture collection no.: DSM 25722, NCCP 13713

straininfo link

  • @ref: 86270
  • straininfo: 397846

Reference

@idauthorscataloguedoi/urltitle
18097Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 25722)https://www.dsmz.de/collection/catalogue/details/culture/DSM-25722
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
68368Automatically annotated from API 20E
86270Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID397846.1StrainInfo: A central database for resolving microbial strain identifiers