Archive BacDiveID:10.13145/bacdive17114.20230509.8.1

Strain identifier

BacDive ID: 17114

Type strain:

Species: Anaeroarcus burkinensis

Strain Designation: B4B0, B₄B₀, B4Bo

Strain history: CIP <- 1998, DSMZ <- J.L. Garcia <- A.S. Ouattara: strain B4Bo

NCBI tax ID(s): 1120985 (strain), 82376 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.

General

@ref: 2569

BacDive-ID: 17114

DSM-Number: 6283

keywords: genome sequence, 16S sequence, Bacteria, anaerobe, mesophilic, motile

description: Anaeroarcus burkinensis B4B0 is an anaerobe, mesophilic, motile bacterium that was isolated from rice field soil.

NCBI tax id

NCBI tax id	Matching level
82376	species
1120985	strain

strain history

@ref	history
2569	<- J.-L. Garcia, Université de Provence, Marseille, France; B₄B₀ <- A. S. Ouattara {1989}
117077	CIP <- 1998, DSMZ <- J.L. Garcia <- A.S. Ouattara: strain B4Bo

doi: 10.13145/bacdive17114.20230509.8.1

Name and taxonomic classification

LPSN

@ref: 20215
description: domain/bacteria
keyword: phylum/bacillota
domain: Bacteria
phylum: Bacillota
class: Negativicutes
order: Selenomonadales
family: Sporomusaceae
genus: Anaeroarcus
species: Anaeroarcus burkinensis
full scientific name: Anaeroarcus burkinensis corrig. (Ouattara et al. 1992) Strömpl et al. 1999
synonyms
@ref synonym
20215 Anaerovibrio burkinabensis
20215 Anaeroarcus burkinabensis

@ref	synonym
20215	Anaerovibrio burkinabensis
20215	Anaeroarcus burkinabensis

@ref: 2569

domain: Bacteria

phylum: Firmicutes

class: Negativicutes

order: Selenomonadales

family: Sporomusaceae

genus: Anaeroarcus

species: Anaeroarcus burkinensis

full scientific name: Anaeroarcus burkinensis (Ouattara et al. 1992) Strömpl et al. 1999

strain designation: B4B0, B₄B₀, B4Bo

type strain: yes

Morphology

cell morphology

@ref	motility	confidence	gram stain	cell shape
69480	yes	96.477
69480		99.807	negative
117077	no		negative	rod-shaped

Culture and growth conditions

culture medium

@ref	name	growth	link	composition
2569	DESULFOBULBUS SP. MEDIUM (FRESHWATER) (DSMZ Medium 194)	yes	https://mediadive.dsmz.de/medium/194	Name: DESULFOBULBUS SP. MEDIUM (FRESHWATER) (DSMZ Medium 194; with strain-specific modifications) Composition: Na2SO4 2.99103 g/l Na-(DL)-lactate 2.49252 g/l Na2CO3 1.49551 g/l Yeast extract 0.997009 g/l NaCl 0.997009 g/l KCl 0.498504 g/l Na2S x 9 H2O 0.398804 g/l MgCl2 x 6 H2O 0.398804 g/l NH4Cl 0.299103 g/l KH2PO4 0.199402 g/l CaCl2 x 2 H2O 0.149551 g/l HCl 0.00249252 g/l FeCl2 x 4 H2O 0.00149551 g/l NaOH 0.000498504 g/l Sodium resazurin 0.000498504 g/l CoCl2 x 6 H2O 0.000189432 g/l MnCl2 x 4 H2O 9.97009e-05 g/l Pyridoxine hydrochloride 9.97009e-05 g/l ZnCl2 6.97906e-05 g/l (DL)-alpha-Lipoic acid 4.98504e-05 g/l Nicotinic acid 4.98504e-05 g/l p-Aminobenzoic acid 4.98504e-05 g/l Riboflavin 4.98504e-05 g/l Calcium D-(+)-pantothenate 4.98504e-05 g/l Thiamine HCl 4.98504e-05 g/l Na2MoO4 x 2 H2O 3.58923e-05 g/l NiCl2 x 6 H2O 2.39282e-05 g/l Biotin 1.99402e-05 g/l Folic acid 1.99402e-05 g/l H3BO3 5.98205e-06 g/l Na2WO4 x 2 H2O 3.98804e-06 g/l Na2SeO3 x 5 H2O 2.99103e-06 g/l CuCl2 x 2 H2O 1.99402e-06 g/l Vitamin B12 9.97009e-07 g/l Distilled water
40140	MEDIUM 20 - for Anaerobic bacteria	yes		Agar (15.000 g);Glucose (5.000 g);Yeast extract (20.000 g);Tryptone (30.000 g);Cysteine hydrochloride (0.500 g);distilled water (1000.000 ml);Hemin solution -M00149 (25.000 ml)
117077	CIP Medium 20	yes	https://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=20

culture temp

@ref	growth	type	temperature	range
2569	positive	growth	35	mesophilic
40140	positive	growth	37	mesophilic
117077	positive	growth	37	mesophilic

Physiology and metabolism

oxygen tolerance

@ref	oxygen tolerance	confidence
2569	anaerobe
69480	anaerobe	99.998

Isolation, sampling and environmental information

isolation

@ref	sample type	geographic location	country	origin.country	continent
2569	rice field soil	Kou Valley	Burkina Faso	BFA	Africa
117077	Environment, Soil, rice field	West Africa	Burkina Faso	BFA	Africa

isolation source categories

Cat1	Cat2	Cat3
#Engineered	#Agriculture	#Field
#Environmental	#Terrestrial	#Soil
#Host	#Plants	#Herbaceous plants (Grass,Crops)

taxonmaps

@ref: 69479
File name: preview.99_13223.png
url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_1373;96_5920;97_7124;98_8799;99_13223&stattab=map
Last taxonomy: Anaeroarcus burkinensis
16S sequence: AJ010961
Sequence Identity:
Total samples: 917
soil counts: 30
aquatic counts: 785
animal counts: 60
plant counts: 42

Safety information

risk assessment

@ref	biosafety level	biosafety level comment
2569	1	Risk group (German classification)
117077	1	Risk group (French classification)

Sequence information

16S sequences

@ref: 2569
description: Anaerovibrio burkinabensis DSM 6283(T), 16S rRNA gene
accession: AJ010961
length: 1506
database: ena
NCBI tax ID: 82376

Genome sequences

@ref	description	accession	assembly level	database	NCBI tax ID
66792	Anaeroarcus burkinensis DSM 6283	GCA_000430605	scaffold	ncbi	1120985
66792	Anaeroarcus burkinensis DSM 6283	1120985.4	wgs	patric	1120985
66792	Anaeroarcus burkinensis DSM 6283	2524614635	draft	img	1120985

GC content

@ref: 2569
GC-content: 44.1

Genome-based predictions

predictions

trait	prediction	confidence	training_data
spore-forming	no	58	no
motile	yes	88.683	no
flagellated	no	58.819	no
gram-positive	no	96.527	no
anaerobic	yes	99.258	yes
aerobic	no	98.066	yes
halophile	no	96.244	no
spore-forming	no	53.365	no
thermophile	no	96.426	yes
glucose-util	yes	72.242	no
glucose-ferment	no	62.936	no

External links

@ref: 2569

culture collection no.: DSM 6283, ATCC 51455, CIP 105409

straininfo link

@ref: 86114
straininfo: 42995

Reference

@id	authors	catalogue	doi/url	title
2569	Curators of the DSMZ	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 6283)	https://www.dsmz.de/collection/catalogue/details/culture/DSM-6283
20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.		10.1099/ijsem.0.004332	List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
40140	Curators of the CIP		https://brclims.pasteur.fr/brcWeb/souche/detail/1/17426
66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann		https://diaspora-project.de/progress.html#genomes	Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)
69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.		https://microbeatlas.org/	MicrobeAtlas 1.0 beta
69480	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann		https://diaspora-project.de/progress.html#genomes	Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)
86114	Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.		10.60712/SI-ID42995.1	StrainInfo: A central database for resolving microbial strain identifiers
117077	Curators of the CIP	Collection of Institut Pasteur (CIP 105409)	https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20105409

General

NCBI tax id

strain history

Name and taxonomic classification

LPSN

synonyms

Morphology

cell morphology

Culture and growth conditions

culture medium

culture temp

Physiology and metabolism

oxygen tolerance

Isolation, sampling and environmental information

isolation

isolation source categories

taxonmaps

Safety information

risk assessment

Sequence information

16S sequences

Genome sequences

GC content

Genome-based predictions

predictions

External links

straininfo link

Reference