Strain identifier

BacDive ID: 17086

Type strain: No

Species: Truepera radiovictrix

Strain Designation: TU-8

Strain history: CIP <- 2005, M. Da Costa, Coimbra Univ., Coimbra, Portugal: strain TU-8

NCBI tax ID(s): 332249 (species)

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General

@ref: 6756

BacDive-ID: 17086

DSM-Number: 17094

keywords: Bacteria, aerobe, thermophilic, Gram-positive, coccus-shaped

description: Truepera radiovictrix TU-8 is an aerobe, thermophilic, Gram-positive bacterium that was isolated from water sample from a hot spring.

NCBI tax id

  • NCBI tax id: 332249
  • Matching level: species

strain history

@refhistory
6756<- M. da Costa <- L. Albuquerque; TU-8 {2004}
122130CIP <- 2005, M. Da Costa, Coimbra Univ., Coimbra, Portugal: strain TU-8

doi: 10.13145/bacdive17086.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/deinococcota
  • domain: Bacteria
  • phylum: Deinococcota
  • class: Deinococci
  • order: Trueperales
  • family: Trueperaceae
  • genus: Truepera
  • species: Truepera radiovictrix
  • full scientific name: Truepera radiovictrix Albuquerque et al. 2005

@ref: 6756

domain: Bacteria

phylum: Deinococcus-Thermus

class: Deinococci

order: Deinococcales

family: Trueperaceae

genus: Truepera

species: Truepera radiovictrix

full scientific name: Truepera radiovictrix Albuquerque et al. 2005

strain designation: TU-8

type strain: no

Morphology

cell morphology

  • @ref: 122130
  • gram stain: positive
  • cell shape: coccus-shaped
  • motility: no

colony morphology

  • @ref: 122130

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
6756THERMUS MEDIUM (DSMZ Medium 1033)yeshttps://mediadive.dsmz.de/medium/1033Name: THERMUS MEDIUM (DSMZ Medium 1033) Composition: Agar 15.0 g/l Yeast extract 1.0 g/l Tryptone 1.0 g/l NaNO3 0.69 g/l Nitrilotriacetic acid 0.1 g/l MgSO4 x 7 H2O 0.1 g/l KNO3 0.1 g/l Na2HPO4 0.1 g/l CaSO4 x 2 H2O 0.06 g/l NaCl 0.008 g/l MnSO4 x H2O 0.0022 g/l ZnSO4 x 7 H2O 0.0005 g/l H3BO3 0.0005 g/l FeCl3 x 6 H2O 0.000459503 g/l CoCl2 x 6 H2O 4.6e-05 g/l Na2MoO4 x 2 H2O 2.5e-05 g/l CuSO4 x 5 H2O 2.5e-05 g/l Distilled water
36763MEDIUM 572 - for Pseudoxantomonas taiwanensisyesDistilled water make up to (1000.000 ml);Sodium chloride (8.000 mg);Zincsulphate heptahydrate (0.500 mg);Boric acid (0.500 mg);Sodium nitrate (689.000 mg);Manganese II sulphate monohydrate (2.200 mg);Magnesium sulphate heptahydrate (100.000 mg);Nitrilotri
122130CIP Medium 572yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=572

culture temp

@refgrowthtypetemperaturerange
6756positivegrowth50thermophilic
36763positivegrowth45thermophilic
122130positivegrowth25-45
122130nogrowth10psychrophilic
122130nogrowth55thermophilic

Physiology and metabolism

oxygen tolerance

@refoxygen tolerance
6756aerobe
122130obligate aerobe

halophily

  • @ref: 122130
  • salt: NaCl
  • growth: no
  • tested relation: growth
  • concentration: 6.5 %

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
1221304853esculin+hydrolysis
122130606565hippurate-hydrolysis
12213017632nitrate-reduction
12213016301nitrite-reduction

metabolite tests

  • @ref: 122130
  • Chebi-ID: 15688
  • metabolite: acetoin
  • voges-proskauer-test: -

enzymes

@refvalueactivityec
122130oxidase+
122130beta-galactosidase+3.2.1.23
122130alcohol dehydrogenase-1.1.1.1
122130catalase+1.11.1.6
122130gamma-glutamyltransferase+2.3.2.2
122130lysine decarboxylase-4.1.1.18
122130ornithine decarboxylase-4.1.1.17
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin+3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase+3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase+3.2.1.20
68382beta-glucosidase+3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
122130-+++-+---+++-+-++---

Isolation, sampling and environmental information

isolation

@refsample typegeographic locationcountryorigin.countrycontinentisolation date
6756water sample from a hot springAzores, Island of Sáo MiguelPortugalPRTEurope
122130Environment, Water sample from a hot springSao Miguel Island, AzoresPortugalPRTEurope2004

isolation source categories

Cat1Cat2Cat3
#Environmental#Aquatic#Thermal spring
#Condition#Thermophilic (>45°C)

Safety information

risk assessment

@refbiosafety levelbiosafety level comment
67561Risk group (German classification)
1221301Risk group (French classification)

External links

@ref: 6756

culture collection no.: DSM 17094, CIP 108687, LMG 22926

straininfo link

  • @ref: 86086
  • straininfo: 297660

literature

  • topic: Phylogeny
  • Pubmed-ID: 15927420
  • title: Truepera radiovictrix gen. nov., sp. nov., a new radiation resistant species and the proposal of Trueperaceae fam. nov.
  • authors: Albuquerque L, Simoes C, Nobre MF, Pino NM, Battista JR, Silva MT, Rainey FA, da Costa MS
  • journal: FEMS Microbiol Lett
  • DOI: 10.1016/j.femsle.2005.05.002
  • year: 2005
  • mesh: Amino Acids/metabolism, Bacteria/*classification/cytology/*isolation & purification/radiation effects, Bacterial Physiological Phenomena, Base Sequence, Carboxylic Acids/metabolism, DNA, Bacterial/chemistry, DNA, Ribosomal/chemistry, Deinococcus/classification, Fatty Acids/analysis/isolation & purification, Fermentation, Glucose/metabolism, Hot Springs/*microbiology, Hydrogen-Ion Concentration, Molecular Sequence Data, Peptidoglycan/analysis, Phylogeny, Pigments, Biological/analysis, Portugal, RNA, Ribosomal, 16S/genetics, Radiation, Ionizing, Sodium Chloride/metabolism, Temperature, Thermus/classification, Vitamin K 2/analogs & derivatives/isolation & purification, Water Microbiology
  • topic2: Metabolism

Reference

@idauthorscataloguedoi/urltitle
6756Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 17094)https://www.dsmz.de/collection/catalogue/details/culture/DSM-17094
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
36763Curators of the CIPhttps://brclims.pasteur.fr/brcWeb/souche/detail/1/6343
68382Automatically annotated from API zym
86086Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID297660.1StrainInfo: A central database for resolving microbial strain identifiers
122130Curators of the CIPCollection of Institut Pasteur (CIP 108687)https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20108687