Strain identifier
BacDive ID: 169751
Type strain: 
Species: Lactococcus ileimucosae
Strain Designation: Cla-TS-109, S109, M9-GB-M-SO-A
Strain history: <- T. Clavel, RWTH Aachen; Cla-TS-109
General
@ref: 69170
BacDive-ID: 169751
DSM-Number: 107391
keywords: genome sequence, Bacteria, mesophilic
description: Lactococcus ileimucosae Cla-TS-109 is a mesophilic bacterium that was isolated from jejunal/ileal mucosa; male, wild mouse.
strain history
- @ref: 69170
- history: <- T. Clavel, RWTH Aachen; Cla-TS-109
doi: 10.13145/bacdive169751.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Bacilli
- order: Lactobacillales
- family: Streptococcaceae
- genus: Lactococcus
- species: Lactococcus ileimucosae
- full scientific name: Lactococcus ileimucosae Afrizal et al. 2023
@ref: 69170
domain: Bacteria
phylum: Firmicutes
class: Bacilli
order: Lactobacillales
family: Streptococcaceae
genus: Lactococcus
species: Lactococcus ileimucosae
full scientific name: Lactococcus ileimucosae
strain designation: Cla-TS-109, S109, M9-GB-M-SO-A
type strain: no
Culture and growth conditions
culture medium
| @ref | name | growth | link |
|---|---|---|---|
| 69170 | COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) | yes | https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium693.pdf |
| 69170 | BHI MEDIUM (DSMZ Medium 215) | yes | https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium215.pdf |
culture temp
- @ref: 69170
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 69170
- sample type: jejunal/ileal mucosa; male, wild mouse
- geographic location: Aachen
- country: Germany
- origin.country: DEU
- continent: Europe
Sequence information
Genome sequences
- @ref: 66792
- description: Lactococcus ileimucosae DSM 107391
- accession: GCA_943193185
- assembly level: contig
- database: ncbi
- NCBI tax ID: 2941329
Genome-based predictions
predictions
| trait | prediction | confidence | training_data |
|---|---|---|---|
| flagellated | no | 97.759 | no |
| gram-positive | yes | 95.099 | no |
| anaerobic | no | 95.086 | no |
| halophile | yes | 81.526 | no |
| spore-forming | no | 93.756 | no |
| thermophile | no | 99.636 | yes |
| glucose-util | yes | 90.42 | no |
| motile | no | 94.998 | no |
| aerobic | no | 97.151 | no |
| glucose-ferment | yes | 84.294 | no |
External links
@ref: 69170
culture collection no.: DSM 107391
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 69170 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-107391 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 107391) |